Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0732 ATGGAATCTTTTGATCAAAGAAATAATAGTGGAGTATTTGGTTCTTCAGCTGCAGTTCCTAGACCACCATCGAACAATAACAGATTGAATGCTTTTAATCAGATGGGTGCAGGTGGCTCTGAGAATCCGAAGCCRGGTATTGGTATACCGCCATCACACCCTAGTACSAATTTGCCATATTCTCAGTATATAGCTTCTCAAAACCAACACCATTTAGGTTCTCAGAGACTGCGTTCGCCCAATTTGAGCCCAGGGTCATCATCATCTTCGTCGCATTCGAGGTCTATGTCCCAACCCTCATTCTTTTCCCTTGATTCCTTGCCACCATTGAGCCCTTTGACTTATCGAGACCCCGCTGCTTCTCCGGTGGCAGCTGCAACCTCTTTTGGTGATTCGGTCACAATGGATGTGTCTATGGAGGAAAATTTAGGTTCYACTCATACTGCRCCWTCTTTGACCGYCAACAGAGGTCATAGTCTTCCTCCTCGCAAGGGGCACAGGCGCAGCAATAGTGATTCCCCTTTAGGAATATCCGGTCTTGTTCAATCTTATTCTCAGTCAGTTCCTACCAAGAATGTGAGCGACCGGGACAATTTGGTCTCCAAAGGAGAAAACACTGGTTTTGAGAAGCCAATTCAGTTAGTTTTAAAGGAGCCAAATAAGGATATGGTCCATTTTGACTGCTTTACTGGAGAAGCTATGGGCAAGAAAGAGGATTGCATAGATGATTTATTTAATGCGTACATGAATTTGGATAACATACAAAATATGAACTTTCCTGGCATGGAAGATAAGGATTTGGATAGCAGAACTAGTGGTTCAAAGACAGTTGAAAGTAGTGACAATGAAGTAGAAAGTCATGCGAATGGAAAGACAACTTCTGCTCAGGGAGCAACATCAAGCTATAAAGAAGAACGGAAGGAGGGTATCAAGAGGGGTTCTAGTGGAGACATTGCACCAGTAGGCCGACACCGGAGAAGCTTTTCATTGGATAGTTCCATCGGGGATTTTCAGCTTGAAGATGAATCTTCTAAGCTGCCTCCTTTGCAAAATCGATTTGGTCAACACTCGCCTAGCAATTCAATAGATGGTAAAACATCTGATACCAGTATAGAGTTTGTAAAGCGTGAATTCAGCTCAGACGAGTTAAAGAAAATAATGGAAAGTGACAAGCTCACTGAGATTGCCATGGCGGATCCAAAGCGTGCAAAACGGATTTTGGCTAATCGTGTCTCAGCTGCTCGGTCAAAGGAAAGGAAAACACGATATATTTCTGAACTGGAGCATAAGGTGCAAACTCTTCAGGCAGAAACAACCTCATTATCTACTCAATTTACTAAACTACAGATGGATAATTCAGAGCTTAAAAGTTTGAATAATGAGTACAAATTGAAGCTTCAAGCCTTGGAACAACAGTCCCAACTGAAAGATGCTTTGAATGAGACCTTGGATGCTGAAGTTCGGCGATTAAGGCGCACTGTCGCAAATCTTGGTGGAGATCCCCTCCTCTAA 1512 0.4292 MESFDQRNNSGVFGSSAAVPRPPSNNNRLNAFNQMGAGGSENPKPGIGIPPSHPSTNLPYSQYIASQNQHHLGSQRLRSPNLSPGSSSSSSHSRSMSQPSFFSLDSLPPLSPLTYRDPAASPVAAATSFGDSVTMDVSMEENLGSTHTAPSLTXNRGHSLPPRKGHRRSNSDSPLGISGLVQSYSQSVPTKNVSDRDNLVSKGENTGFEKPIQLVLKEPNKDMVHFDCFTGEAMGKKEDCIDDLFNAYMNLDNIQNMNFPGMEDKDLDSRTSGSKTVESSDNEVESHANGKTTSAQGATSSYKEERKEGIKRGSSGDIAPVGRHRRSFSLDSSIGDFQLEDESSKLPPLQNRFGQHSPSNSIDGKTSDTSIEFVKREFSSDELKKIMESDKLTEIAMADPKRAKRILANRVSAARSKERKTRYISELEHKVQTLQAETTSLSTQFTKLQMDNSELKSLNNEYKLKLQALEQQSQLKDALNETLDAEVRRLRRTVANLGGDPLL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0732 503 MobiDBLite consensus disorder prediction 286 300 - -
Amo06g0732 503 MobiDBLite consensus disorder prediction 255 366 - -
Amo06g0732 503 Pfam bZIP transcription factor 401 459 IPR004827 GO:0003700|GO:0006355
Amo06g0732 503 MobiDBLite consensus disorder prediction 1 37 - -
Amo06g0732 503 ProSiteProfiles GGDEF domain profile. 443 503 IPR000160 -
Amo06g0732 503 MobiDBLite consensus disorder prediction 137 181 - -
Amo06g0732 503 SMART brlzneu 397 461 IPR004827 GO:0003700|GO:0006355
Amo06g0732 503 Coils Coil 417 444 - -
Amo06g0732 503 Gene3D - 400 463 - -
Amo06g0732 503 MobiDBLite consensus disorder prediction 54 107 - -
Amo06g0732 503 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 72 502 - -
Amo06g0732 503 CDD bZIP_plant_RF2 402 452 IPR044759 GO:0003700|GO:0006355
Amo06g0732 503 PANTHER BZIP TRANSCRIPTION FACTOR 72 502 - -
Amo06g0732 503 Coils Coil 452 489 - -
Amo06g0732 503 MobiDBLite consensus disorder prediction 1 117 - -
Amo06g0732 503 MobiDBLite consensus disorder prediction 137 155 - -
Amo06g0732 503 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 399 462 IPR004827 GO:0003700|GO:0006355
Amo06g0732 503 MobiDBLite consensus disorder prediction 331 366 - -
Amo06g0732 503 SUPERFAMILY Leucine zipper domain 401 457 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0732 Amo-Chr6 10405335 10409414 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Amo06g0732 bZIP_1 2.3e-11 CL0018