Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0717 ATGGGTGATTCAGGATCTTCCAAGAGAATGTGGTGCTCAGTGCCAGAAAAGTTTCAGCTGCATGGAGCAATGTTGGCACTTCAATTTGGATATGCTGGCTTCCATGTTGTTTCAAGGGCTGCCCTTAACATGGGAGTTAGCAAGCTTGTTTTTCCAGTTTATAGGAACATCATTGCTTTGCTTCTCCTTCTTCCCTTTGCATACTTCTTGGAAAAGAAGGAGAGGCCAGCGATGACAGTGAACTTCCTAGGCCAGTTCTTTGTTCTGGCACTTGTCGGGATTACAGCAAATCAAGGTTTCTATTTGCTTGGGTTGGAGAACACATCACCTACCTTCGCTTCAGCAATACAGAACTCTGTTCCAGCCATTACATTTCTCATGGCTGCTATACTCAGGATCGAACAAGTGAGACTAAATAGAAAAGATGGAATATCGAAAGTAGTTGGAACAATCCTATGTGTAATTGGTGCAACAGTGATCACACTCTACAAGGGTCCAACAATATACTCTCCAAAACCAACAACAACATTATTATTAACAACAAGATCAACATTAATGGATCCAGTTGATGAGGGCAAAAACTGGACCCTAGGGTGCATTTACCTAATTGGACATTGTTTGTCATGGTCTGGTTGGCTTGTGTTGCAAGCACCTGTTCTCAAGAAATACCCTGCAAGGCTCTCTGTCACTTCATACACTTGCTTCTTTGGATTATTGCAATTCATTCTCATTGCTCTCATTTTTGAAAGAGATTATCAAGCTTGGCTTTTCCATTCTGGTGCTGAAGCCTTCACTATTCTATATGCGGGAGTGGTGGCATCAGGAATTGCATTCGCTGTACAAATATGGTGCATTGATAGAGGGGGCCCTGTGTTCGTTGCTGTGTATCAACCTGTTCAGACTTTTGTTGTTGCAATCATGGCTTCCTTTGCTCTTGGAGAAGAGTTCTACTTGGGAGGGATCATTGGGGCAGTGCTAATTGTGGTTGGACTCTACCTAGTTTTGTGGGGTAAAAGTGAAGAGAAGAGGATTGCACAACTTGGAATGGCATCAAATAATATTAATGGAGATCATAGCATTATTAGGGCTTCAAGTCATGCCAAAGCATCATCACTCACTCAGCCACTAATCCTCCCTTCATCAACTGACAATCACGTTTAA 1161 0.4246 MGDSGSSKRMWCSVPEKFQLHGAMLALQFGYAGFHVVSRAALNMGVSKLVFPVYRNIIALLLLLPFAYFLEKKERPAMTVNFLGQFFVLALVGITANQGFYLLGLENTSPTFASAIQNSVPAITFLMAAILRIEQVRLNRKDGISKVVGTILCVIGATVITLYKGPTIYSPKPTTTLLLTTRSTLMDPVDEGKNWTLGCIYLIGHCLSWSGWLVLQAPVLKKYPARLSVTSYTCFFGLLQFILIALIFERDYQAWLFHSGAEAFTILYAGVVASGIAFAVQIWCIDRGGPVFVAVYQPVQTFVVAIMASFALGEEFYLGGIIGAVLIVVGLYLVLWGKSEEKRIAQLGMASNNINGDHSIIRASSHAKASSLTQPLILPSSTDNHV* 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0717 386 Pfam EamA-like transporter family 197 335 IPR000620 GO:0016020|GO:0016021
Amo06g0717 386 Pfam EamA-like transporter family 25 161 IPR000620 GO:0016020|GO:0016021
Amo06g0717 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 238 340 - -
Amo06g0717 386 SUPERFAMILY Multidrug resistance efflux transporter EmrE 54 164 - -
Amo06g0717 386 PANTHER WAT1-RELATED PROTEIN 13 344 IPR030184 GO:0016021|GO:0022857
Amo06g0717 386 PANTHER WAT1-RELATED PROTEIN 13 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0717 Amo-Chr6 10153981 10156861 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0717 06 10153981 10156861 Amo17g2199 17 112878065 112881753 PCT
Amo17g2199 17 112878065 112881753 Amo06g0717 06 10153981 10156861 PCT