Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0714 ATGGCAGAAGGACAAGTCATCCCTGTTAAAAGCCTTCAGACATGGAAGGATCAACTCAAGTTAGGAACCGATTCCAAGAAGCTGGTTGCGGTGGATTTCACAGCTACTTGGTGTGGTCCATGCCGTTTCATTGGTCCAGTTTTTGCAGATCTTGCTAAGAAGACACCCAATGTAATCTTTCTTAAGGTGGATGTAGATGAAATGAGGGATATTGCTGAGGAATGGGGAGTAGAAGCAATGCCAACCTTCATATTCTTCAAAGAAGGCAAGGCAGTGGATAGGGTTGTTGGTGCCAAGAAGGAAGAACTAGAACATGCAATAGCCAAGCATTCAGCTTCGTATTAA 345 0.4406 MAEGQVIPVKSLQTWKDQLKLGTDSKKLVAVDFTATWCGPCRFIGPVFADLAKKTPNVIFLKVDVDEMRDIAEEWGVEAMPTFIFFKEGKAVDRVVGAKKEELEHAIAKHSASY* 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0714 114 TIGRFAM thioredoxin: thioredoxin 23 110 IPR005746 GO:0015035
Amo06g0714 114 Pfam Thioredoxin 13 108 IPR013766 -
Amo06g0714 114 ProSiteProfiles Thioredoxin domain profile. 1 112 IPR013766 -
Amo06g0714 114 PRINTS Thioredoxin family signature 29 37 - -
Amo06g0714 114 PRINTS Thioredoxin family signature 37 46 - -
Amo06g0714 114 PRINTS Thioredoxin family signature 76 87 - -
Amo06g0714 114 Gene3D Glutaredoxin 1 113 - -
Amo06g0714 114 CDD TRX_family 24 108 - -
Amo06g0714 114 PANTHER THIOREDOXIN 2 112 - -
Amo06g0714 114 SUPERFAMILY Thioredoxin-like 3 112 IPR036249 -
Amo06g0714 114 PANTHER THIOREDOXIN 2 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0714 Amo-Chr6 10124333 10125036 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0714 06 10124333 10125036 Amo08g0138 08 2516296 2517249 PCT
Amo06g0714 06 10124333 10125036 Amo17g2209 17 113227526 113228609 PCT
Amo08g0138 08 2516296 2517249 Amo06g0714 06 10124333 10125036 PCT
Amo17g2209 17 113227526 113228609 Amo06g0714 06 10124333 10125036 PCT