Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0713 ATGGAAACTAACTCAGTTTCCAAGCTTAGATTCTTGTTCTTCATGTGTGTACTTTTTGTGGGGTGTGATTTGATCCAATGCAGTGTRACCTATGATAAAAAAGCCATTGTTATCAATGGCCAAAGAAGAATCCTCATATCTGGCTCCATTCACTATCCTAGAAGCACCCCAGAAATGTGGGAGGATCTGATAACAAAGGCCAAAAATGGAGGACTTGATGTAATTGATACCTATGTTTTCTGGAATGTTCATGAACCTTCTCCTGGCAATTATAATTTTGAAGGAAGATATGATCTTGTACGGTTCATTAAGACAGTGCAGAAAGTGGGACTCTATGTTCATCTTCGGATTGGTCCTTATGTTTGTGCTGAGTGGAATTTTGGAGGATTTCCTGTTTGGTTGAAATATGTTCCTGGCATCAGTTTCAGAACAGATAATGGTCCTTTTAAGGTAAAGATGCATAGATTCACTGAGAAAATTGTCCAAATGATGAAGAATGAGAAGCTATTCCAATCTCAGGGTGGCCCTATCATTCTTTCTCAGATTGAGAATGAATATGGASCACAAAGCAAGTCACTTGGAGCAGCTGGTCATTCATATGTAAACTGGGCTGCAAGAATGGCTGTTGGGTTAGCCACTGGAGTCCCTTGGGTTATGTGCAAAGAAGATGATGCCCCAGATCCTATTATAAATACTTGTAACGGATTCTACTGTGACTATTTCACTCCAAACAAACCATACAAGCCTAAACTTTGGACTGAGTTTACTGAATTTGGTGGACCAATTTACCAACGACCTGTTGAGGATCTAGCATTTGGAGTTGCTCGTTTTATTCAAAGTGGAGGCTCATATTTTAATTACTACATGTACCATGGAGGAACCAATTTTGGAAGATCAGCTGGAGGCCCATTCATTACTACAAGCTATGACTATGATGCTCCAATTGATGAATATGGATTGATTAGAGAACCTAAATACAGTCATTTGAAGGATCTTCATGAAGCTATTAAGCAATGTGAAGCTGCTTTGGTTTCTTCAGATCCTGTTGTTAAACCTTTAGGAACATATGAGCAGGCTCATGTATTCTCTTCTGGAAGAACTTGTGCCGCTTTTCTGTCAAACTACCACTCGAATTCTGCAGCTCGAGTGACCTTCAATGGCAGACACTATGACTTGCCTGCTTGGTCCATAAGCATTCTTCCTGATTGCAAAACAGATGTTTTCAACACGGCAAGAGTGAGGACTAAACCTTCAGCAGCACAAATGTTACCTAGCAATTCAAAATTCTTATCATGGGAGACCTATGATGAGGATGTGAATTCTTTAGAGGAATCTTCAAGGATTTCAGGTTCTGGTCTTAAGGAACAGATAAGTGTTACCAGAGACACTAGTGACTACTTGTGGTACATTACCAGYGTTGACATTAGTTCATCAGAATCCTCTCTTAGAGGCGGACACAAGCCTAGCATCAATGTGCATTCGGAAGGCGACGCGGTCCATGTRTTTGTGAATGGACAATTTGTAGGTTCTGCTTTTGGGACAATGGAAAGAAGAAGTTTCACATTCAATGGCCCTGTCAACCTCCATGCCGGATCTAACAAAATAGCACTACTCAGCATAGCTGCTGGATTGCCGAATGTTGGATTCCGTTATGAAACATGGAAGACAGGTATCTCCGGAGTTTCCATCCAAGGTCTCGATCATGGACAGAAAGATTTGACATGGCAAAGGTGGTCCTACCAGGTTGGTCTTAAAGGAGAAGCTATGAATTTGGTGTCTCCAATTAAGGTCTCATCTGTTGATTGGGTTAGAGAGTCACTAGCCACTCAAAACCAGCCCCAATTGAAATGGCACAAGGCATATTTCAATGCACCTGATGGAAATGAACCATTGGCATTGGACCTTGGAAGCATGGGAAAGGGTCAAGTATGGATCAATGGACAAAGCATAGGAAGATATTGGATGGTTTATGCAAAGGGTCAATGCAATTCTTGCAACTATGCTGGCACATATAGACCTGCAAAATGCCAACTTGGTTGTGGACAACCAACTCAAAGATGGTATCATGTTCCAAGATCATGGTTAAAGCCAACAAAGAACTTAATAGTAGTTTTTGAGGAATTAGGTGGGAATCCATGGAAAATATCTTTGGTAAAGAGGACAATACATTGA 2172 0.4084 METNSVSKLRFLFFMCVLFVGCDLIQCSVTYDKKAIVINGQRRILISGSIHYPRSTPEMWEDLITKAKNGGLDVIDTYVFWNVHEPSPGNYNFEGRYDLVRFIKTVQKVGLYVHLRIGPYVCAEWNFGGFPVWLKYVPGISFRTDNGPFKVKMHRFTEKIVQMMKNEKLFQSQGGPIILSQIENEYGXQSKSLGAAGHSYVNWAARMAVGLATGVPWVMCKEDDAPDPIINTCNGFYCDYFTPNKPYKPKLWTEFTEFGGPIYQRPVEDLAFGVARFIQSGGSYFNYYMYHGGTNFGRSAGGPFITTSYDYDAPIDEYGLIREPKYSHLKDLHEAIKQCEAALVSSDPVVKPLGTYEQAHVFSSGRTCAAFLSNYHSNSAARVTFNGRHYDLPAWSISILPDCKTDVFNTARVRTKPSAAQMLPSNSKFLSWETYDEDVNSLEESSRISGSGLKEQISVTRDTSDYLWYITSVDISSSESSLRGGHKPSINVHSEGDAVHVFVNGQFVGSAFGTMERRSFTFNGPVNLHAGSNKIALLSIAAGLPNVGFRYETWKTGISGVSIQGLDHGQKDLTWQRWSYQVGLKGEAMNLVSPIKVSSVDWVRESLATQNQPQLKWHKAYFNAPDGNEPLALDLGSMGKGQVWINGQSIGRYWMVYAKGQCNSCNYAGTYRPAKCQLGCGQPTQRWYHVPRSWLKPTKNLIVVFEELGGNPWKISLVKRTIH* 724
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0713 723 Gene3D Glycosidases 22 339 - -
Amo06g0713 723 Pfam Glycosyl hydrolases family 35 36 335 IPR031330 -
Amo06g0713 723 PANTHER BETA-GALACTOSIDASE RELATED 3 723 IPR001944 GO:0004553|GO:0005975
Amo06g0713 723 Gene3D - 425 564 - -
Amo06g0713 723 Gene3D - 587 723 - -
Amo06g0713 723 SUPERFAMILY Galactose-binding domain-like 397 558 IPR008979 -
Amo06g0713 723 SUPERFAMILY Galactose-binding domain-like 576 717 IPR008979 -
Amo06g0713 723 PRINTS Glycosyl hydrolase family 35 signature 60 78 IPR001944 GO:0004553|GO:0005975
Amo06g0713 723 PRINTS Glycosyl hydrolase family 35 signature 115 134 IPR001944 GO:0004553|GO:0005975
Amo06g0713 723 PRINTS Glycosyl hydrolase family 35 signature 303 319 IPR001944 GO:0004553|GO:0005975
Amo06g0713 723 PRINTS Glycosyl hydrolase family 35 signature 172 187 IPR001944 GO:0004553|GO:0005975
Amo06g0713 723 PRINTS Glycosyl hydrolase family 35 signature 640 656 IPR001944 GO:0004553|GO:0005975
Amo06g0713 723 PRINTS Glycosyl hydrolase family 35 signature 283 298 IPR001944 GO:0004553|GO:0005975
Amo06g0713 723 PRINTS Glycosyl hydrolase family 35 signature 39 56 IPR001944 GO:0004553|GO:0005975
Amo06g0713 723 PRINTS Glycosyl hydrolase family 35 signature 613 627 IPR001944 GO:0004553|GO:0005975
Amo06g0713 723 Pfam Beta-sandwich domain in beta galactosidase 343 413 IPR041392 -
Amo06g0713 723 SUPERFAMILY (Trans)glycosidases 28 340 IPR017853 -
Amo06g0713 723 PANTHER BETA-GALACTOSIDASE 3 723 - -
Amo06g0713 723 ProSitePatterns Glycosyl hydrolases family 35 putative active site. 174 186 IPR019801 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0713 Amo-Chr6 10118944 10123678 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo06g0713 06 10118944 10123678 Amo08g0137 08 2511049 2515162 PCT
Amo08g0137 08 2511049 2515162 Amo06g0713 06 10118944 10123678 PCT