Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0704 ATGTATCAGAACCAGGCCTTTCCTTCAGGATCCTATGAAGAAATGTTATCTGGGAATTCCCTATTAACTCATCATAACTATGGCGATTCGGTTGGAGGAGGAGGACACAACAATGAGCTGAAGTTCATCACCTCTCTAGGTGAATCAATGACTATGCAGCCTCTTGAAGAGCATTCCAATGCTGCTGCGACCGGCGATCCATCTTGCAACTCTTTTGGTGATCAAAACATTCAGTGCCAAGGTTTGTCGCTTAGCCTTGGATCGGTTATGCCTTCTATTGCAACATCAATGCCTCATCACTTTCAATACCCGCAGTATCACAACTCTAGCTTCACTTCACTGATGAATGCCATGCCAAACTTAAAGGGAAATAATGGATCATCTCTTAAGGATGATGAGGTGAGAAACACCGAATGCATGACCCCGCCAATGTCTTCCGGAGGATTCTACAACTCTATAAAGAGGGAAGGTTTGTATAACAATACTAATCATCCTTCAATGTGCCTCAGCGAAGGCCAGGTTGATCCAGGCCTACACGGATCGGCTGGTTTTTCCTCCAGTACTGCCTTAAACTCACAATACCTGAAGGCAGCACAGGAGTTGCTTGATGAAATAGTTAATGTTCGAAAGGCTTTGAAGCAACCCGGATTGGAGAAACAACAGAGTTTTCGTGATGCCGGATTAGATGGCTCCAAAGATTCTGATGGAAAATCTAATAGTCAATCTATGCAAGTATCTTCAGGTGCCAATGGTTCTGCTGTAAACTCTTCAACCGAGCTATCGCCGGCAGACCGACAGAATTTGTTGGACAAGAAGACAAAACTTTTGGCTATGTTAGATGAGGTAGATAAAAGATACAGACAGTATTGCCATCAGATGCAAATTGTGGTATCATCATTTGATATGGTTGCCGGGTGTGGAGCTGCCGAACCATACACTGCGCTTGCATTGCGCACAATTTCACGCCACTTTCGATGTTTGCGCGACGCCATCAGTGGCCAGATTCAAGTGACTCAGAGGAGCCTTGGAGAGCAAGAGGGAATACCTCGGCTCCGCTACGTCGATCAGCAACTAAGGCAACAAAAGGCACTTCAGCAACTTGGTGTGATGAGGCAAGCTTGGAGACCTCAGAGGGGACTTCCTGAGAGCTCTGTTTCTATACTTCGCGCGTGGCTATTCGAGCATTTCCTTCATCCTTATCCAAAGGATTCAGAGAAGATTATGCTGGCAAGGCAAACAGGCTTGACCAGAAACCAGGTGGCAAATTGGTTCATAAATGCAAGGGTGCGGCTATGGAAGCCAATGGTTGAAGAAATGTATAAAGAAGAATTTGGTGATTCTGAGATGAGTTGCAACCTCTTATCTGAAAACACCATACCAAAAGCTTCAAGAGATGATGTTCAAGTTTCTGATAATAACAAAAGAGAAGAATCACAAGAAAATTTGGCAGCTGTTGATGATAGTGTTCAACATGGTATCCAAAGTAGTGATTATGGTGAAAACCTCATGGATTCTTCTTCTTCAAGGACTAGTAGGAAATTGCAACAATGTGATCAAAGATTTAACATGAAAAACACACCGTTTTCAAATGCTTCTACAATACAAATCAATCACCATAATGGTCATGATGATGGTAATGGTTGCTTAGCTTCTACTCATGCAACATATGATTATTCCGCATTGGGAAACTTTGCGGCCGTTGGTGGCCATGTGTCCCTTGCGCTCGAGTTGAGGAACCGCGAGAGCAATGGATTAGGCATGTCAAATGGTGATGAGATACACAACAAAAGAAGTAGTAACCAGACTTTGGCTTCTTCATCTGAGAATGATTTGTTGGATTATCATTTGACAGAACAAGAGAAGCAACAGCAACAACAACAACACAAGTTTGGGAATCCACAACAACGGTTGTTACACGAGTTTGTTGTTTGA 1932 0.4337 MYQNQAFPSGSYEEMLSGNSLLTHHNYGDSVGGGGHNNELKFITSLGESMTMQPLEEHSNAAATGDPSCNSFGDQNIQCQGLSLSLGSVMPSIATSMPHHFQYPQYHNSSFTSLMNAMPNLKGNNGSSLKDDEVRNTECMTPPMSSGGFYNSIKREGLYNNTNHPSMCLSEGQVDPGLHGSAGFSSSTALNSQYLKAAQELLDEIVNVRKALKQPGLEKQQSFRDAGLDGSKDSDGKSNSQSMQVSSGANGSAVNSSTELSPADRQNLLDKKTKLLAMLDEVDKRYRQYCHQMQIVVSSFDMVAGCGAAEPYTALALRTISRHFRCLRDAISGQIQVTQRSLGEQEGIPRLRYVDQQLRQQKALQQLGVMRQAWRPQRGLPESSVSILRAWLFEHFLHPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEMYKEEFGDSEMSCNLLSENTIPKASRDDVQVSDNNKREESQENLAAVDDSVQHGIQSSDYGENLMDSSSSRTSRKLQQCDQRFNMKNTPFSNASTIQINHHNGHDDGNGCLASTHATYDYSALGNFAAVGGHVSLALELRNRESNGLGMSNGDEIHNKRSSNQTLASSSENDLLDYHLTEQEKQQQQQQHKFGNPQQRLLHEFVV* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0704 643 MobiDBLite consensus disorder prediction 233 264 - -
Amo06g0704 643 MobiDBLite consensus disorder prediction 217 265 - -
Amo06g0704 643 Gene3D - 371 448 - -
Amo06g0704 643 Pfam Associated with HOX 190 332 IPR006563 -
Amo06g0704 643 MobiDBLite consensus disorder prediction 586 606 - -
Amo06g0704 643 SUPERFAMILY Homeodomain-like 375 441 IPR009057 -
Amo06g0704 643 MobiDBLite consensus disorder prediction 467 482 - -
Amo06g0704 643 CDD homeodomain 374 435 IPR001356 GO:0003677
Amo06g0704 643 MobiDBLite consensus disorder prediction 461 514 - -
Amo06g0704 643 Pfam Homeobox KN domain 391 430 IPR008422 GO:0003677|GO:0006355
Amo06g0704 643 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 32 600 - -
Amo06g0704 643 SMART HOX_1 374 438 IPR001356 GO:0003677
Amo06g0704 643 ProSiteProfiles 'Homeobox' domain profile. 371 434 IPR001356 GO:0003677
Amo06g0704 643 SMART prehox3 182 333 IPR006563 -
Amo06g0704 643 MobiDBLite consensus disorder prediction 483 514 - -
Amo06g0704 643 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 32 600 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0704 Amo-Chr6 10010668 10014999 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Amo06g0704 POX 4.3e-51 No_clan