Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0701 ATGAGACATGGATTGATAAATGATGATGATGTTGAAAATGTTGAGATATGGATTGAGAATTCGTCCAACGGGAAGAGGAGACTCGTAGGTATACGAATAGTTGATGCACTCGTTGCGCATGTAGCGCGAGAGAACGCGGCCGTCGGCGGTGAGTCCGGCGATGGCAACGCCGATGTGGTCATCGACTTTGAAGATCTTCTTCTGGTGAGAAGAGAGCTTACTTCTCCAAATCCAAGGACATACATTGGCTCCGGAAAGGTTTCTGAAATTAAGAGTGCAATCCATGCCTTGGACGTTGAAACTGTAATCTTTTATGATGAGCTATCACCTGGGCAATTGCGCAACCTGGAAAAGGTTTTTGGTGGGGACGTGAGAGTTTGTGATCGAACTGCTCTCATCCTTGATATATTTAATCAGGGAGCAGCAACACATGAAGCATCGTTACAGGTTTCATTAGCACAAATGGAATACCAACTACCGCGTCTAACAAAAATGTGGACACATCTTGAGCGTCAATCAGGAGGAAAGGTGAAGGGGGGAGAAAAACAAATAGAAGTGGACAAGCGTATTTTGCGAAACCAAATTGGTGCACTTAAGAAAGAGCTAGAATCTGTTAGGAAACACCGACAGCAGTACCGTAACAGGCGTTTCTCAGTACCTGTGCCGGTGGTAGCCTTGGTTGGGTACACAAATGCTGGAAAGAGTACCCTTTTAAATCAATTAACTGGGGCAGATGTTTTTGCCGAGGATAAATTATTTGCAACTTTAGATCCAACTACAAGGAGGGTCCAGCTGAAGAATGGAAAGGAGTTTCTCCTAACAGACACTGTTGGTTTTATTCAGAAATTGCCAACTCAACTGGTTGCTGCCTTCAGAGCTACGCTGGAGGAGATATCAGAGTCGTCACTTCTGGTGCATGTAGTTGATATCAGTCATCCCCTGGCAGAGCAACAAATAAATGCTGTTGACAAAGTTCTGTCAGAACTAGATGTATCATCTATTCCAAGATTGATGGTTTGGAACAAGGTTGATAAGGCTAGTGATCCCCAGAAAATCAGGTTAGAAGCTGAAAATAGAGATGATGTTGTATGCATATCTGCATTAACGGGTGATGGCCTACCAGAATTCTGTAACTCAGTTCAAGAAAAATTGAAGGACTCCATGGTGTGGGTTGAAGCTTTGGTACCATTTGAAAATGGAGACCTTCTCAGCACCATACACCAAGTTGGAATGGTTGAGAAAACTGAATACACAGAGCAAGGGACATATATCAAGGCACATGTGCCCCTTCGTTTTGCAACATTGCCGACACCCATGAGGCAAATGTGTGTATCCCAATCTTAA 1344 0.4382 MRHGLINDDDVENVEIWIENSSNGKRRLVGIRIVDALVAHVARENAAVGGESGDGNADVVIDFEDLLLVRRELTSPNPRTYIGSGKVSEIKSAIHALDVETVIFYDELSPGQLRNLEKVFGGDVRVCDRTALILDIFNQGAATHEASLQVSLAQMEYQLPRLTKMWTHLERQSGGKVKGGEKQIEVDKRILRNQIGALKKELESVRKHRQQYRNRRFSVPVPVVALVGYTNAGKSTLLNQLTGADVFAEDKLFATLDPTTRRVQLKNGKEFLLTDTVGFIQKLPTQLVAAFRATLEEISESSLLVHVVDISHPLAEQQINAVDKVLSELDVSSIPRLMVWNKVDKASDPQKIRLEAENRDDVVCISALTGDGLPEFCNSVQEKLKDSMVWVEALVPFENGDLLSTIHQVGMVEKTEYTEQGTYIKAHVPLRFATLPTPMRQMCVSQS* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0701 447 ProSiteProfiles HflX-type guanine nucleotide-binding (G) domain profile. 222 388 IPR030394 GO:0005525
Amo06g0701 447 PIRSF GTP-binding_hflX 60 443 IPR016496 GO:0005525
Amo06g0701 447 Pfam HflX C-terminal domain 354 422 IPR045498 -
Amo06g0701 447 PANTHER GTP-BINDING PROTEIN 6-RELATED 72 432 - -
Amo06g0701 447 Pfam 50S ribosome-binding GTPase 224 342 IPR006073 GO:0005525
Amo06g0701 447 Gene3D - 221 389 IPR027417 -
Amo06g0701 447 Pfam GTP-binding GTPase Middle Region 141 216 IPR032305 -
Amo06g0701 447 PANTHER GTP-BINDING PROTEIN HFLX 72 432 IPR016496 GO:0005525
Amo06g0701 447 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 222 394 IPR027417 -
Amo06g0701 447 TIGRFAM GTP_HflX: GTP-binding protein HflX 69 384 IPR016496 GO:0005525
Amo06g0701 447 Hamap GTPase HflX [hflX]. 60 413 IPR016496 GO:0005525
Amo06g0701 447 TIGRFAM small_GTP: small GTP-binding protein domain 223 375 IPR005225 GO:0005525
Amo06g0701 447 Coils Coil 188 215 - -
Amo06g0701 447 Pfam GTP-binding GTPase N-terminal 72 137 IPR025121 -
Amo06g0701 447 Gene3D - 60 140 IPR042108 -
Amo06g0701 447 Gene3D - 141 207 - -
Amo06g0701 447 PRINTS GTP1/OBG GTP-binding protein family signature 224 244 IPR006073 GO:0005525
Amo06g0701 447 PRINTS GTP1/OBG GTP-binding protein family signature 291 309 IPR006073 GO:0005525
Amo06g0701 447 CDD HflX 181 384 IPR030394 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0701 Amo-Chr6 9930362 9935946 Proximal