Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo06g0693 ATGCACGCAGAAGATAACTACAACGCCTGCACTCTATTCCCAAAGAATTTTCGCAGTGTTGAATACGCAACGGAGGCAGTGAAGCAGGGTTCCGCCGCAATTGGCCTCCGATCCAAAACGCACGTCGTTTTAGCATGCGTCAACAAGGCCAACTCCGAGCTCTCTTCTCACCAGAAGAAGATCTTCAAAGTCGATGACCACATCGGCGTTGCCATCGCCGGACTCACCGCCGACGGCCGCGTTCTCTCGCGCTACATGCGCAACGAGTGCATCAACTATTCGTATACCTACGAGTCTCCTCTTCCCGTTGGACGACTCGTCGTTCAGCTCGCTGACAAGGCTCAGTCTCACAGTTAA 357 0.535 MHAEDNYNACTLFPKNFRSVEYATEAVKQGSAAIGLRSKTHVVLACVNKANSELSSHQKKIFKVDDHIGVAIAGLTADGRVLSRYMRNECINYSYTYESPLPVGRLVVQLADKAQSHS* 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo06g0693 118 Pfam Proteasome subunit 27 117 IPR001353 GO:0005839|GO:0051603
Amo06g0693 118 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 15 118 IPR029055 -
Amo06g0693 118 ProSiteProfiles Proteasome alpha-type subunit profile. 19 118 IPR023332 -
Amo06g0693 118 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 19 116 IPR029055 -
Amo06g0693 118 PANTHER PROTEASOME SUBUNIT ALPHA TYPE 19 116 - -
Amo06g0693 118 PANTHER PROTEASOME SUBUNIT ALPHA/BETA 19 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo06g0693 Amo-Chr6 9829404 9831215 Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo16g3985 16 151805166 151808001 Amo06g0693 06 9829404 9831215 hybridization