Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo05g0654 ATGGAGCTTCTTGTGTTGTCTACACTCCAATGGAGGATGAACCCTGTCACCCCAATTTCCTTCTTTGAACACATTGTTAGAAGGATTGGTTTGCATTGGGAGTTCTTATGGAGGTGCCAGCGTGTTCTTCTTTCTGTCATTCCCAATTCAAGGTTCATGGGTTATCTCCCTTCTACATTGGCTGCTGCTACCATGATCCATGTTATTAAAGAGATTGAACCGTTAAATGCAATGGAATACATAAATCAACTCATGGGGTTACTCAAGACTAGTGAGGAACAAGTGAATGAGTGCTACAAACACATAGTGAAACAACTGGTTTTGAATCATGAAGGCATTTACAATGTTTGCCAAAAACGCAAACGGATATCCGAACCAAGTAGCCCCGGGGGTGTAATTGATGCATCATTCAGTTGTGACAGCTCAAATGATTCATGGACAGCAGCATCTTTGATCTCTCCTTCACTATCAATGGAGCCAATGTTTAAGAGGAGCAGAGCTCCGGACCAGCAGATGCGATTCGCCACAGTAAATCGAGTGTCTATCAATGTTATAGATAGTCCTCCTTAA 570 0.4246 MELLVLSTLQWRMNPVTPISFFEHIVRRIGLHWEFLWRCQRVLLSVIPNSRFMGYLPSTLAAATMIHVIKEIEPLNAMEYINQLMGLLKTSEEQVNECYKHIVKQLVLNHEGIYNVCQKRKRISEPSSPGGVIDASFSCDSSNDSWTAASLISPSLSMEPMFKRSRAPDQQMRFATVNRVSINVIDSPP* 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo05g0654 189 PANTHER CYCLIN-D3-2 1 172 - -
Amo05g0654 189 Gene3D - 1 113 - -
Amo05g0654 189 SUPERFAMILY Cyclin-like 17 112 IPR036915 -
Amo05g0654 189 SMART Cyclin_C_2 16 129 IPR004367 -
Amo05g0654 189 PANTHER CYCLINS 1 172 IPR039361 -
Amo05g0654 189 Pfam Cyclin, C-terminal domain 16 114 IPR004367 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo05g0654 Amo-Chr5 7749715 7750786 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo05g0654 1 179 Core Cell Cycle Gene Families AT5G67260 48.128 4.51e-48 159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo05g0654 05 7749715 7750786 Amo19g4168 19 158217061 158218951 PCT