Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo04g1886 ATGATTAGACATAAACTTGTGAATCCAATGAGAGAGATGAAGGTGCAGAAGCTCGTTCTCAATATCTCCATGGGTGAGAGTGGAGATTGTCTCACTAGAGCCACAAAGGTTCTAACTTCAAACCTTAGTGATTGCACTAGAGAGAATCTTTTCATACCAATTTCAGTTCAACACTCTGAGCTTGGAAACTATATTTTATTGACTATATACTCTTGCTTTGTTCAGGTTTATAAGAACATATGGAGCAACTTTCTATATCAATCAATCTCTCTTAAAACCACCGACTTTGTCAATTAA 297 0.3603 MIRHKLVNPMREMKVQKLVLNISMGESGDCLTRATKVLTSNLSDCTRENLFIPISVQHSELGNYILLTIYSCFVQVYKNIWSNFLYQSISLKTTDFVN* 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo04g1886 98 Gene3D - 2 60 IPR022803 -
Amo04g1886 98 SUPERFAMILY RL5-like 3 52 IPR022803 -
Amo04g1886 98 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 4 40 IPR002132 GO:0003735|GO:0005840|GO:0006412
Amo04g1886 98 PANTHER 60S RIBOSOMAL PROTEIN L11 4 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo04g1886 Amo-Chr4 86603070 86604865 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo04g1886 5 38 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 82.353 1.11e-12 58.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo04g1886 K02868 - nnu:104588491 58.9214