Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Amo04g1247 | ATGGTTTATACTTCCATCCCAGCATATATTGATCCAGTCAATTGGCATCAGCAACAGCAACCAAATCATCAACAAAACAACACAGGTGGCACAAGCTCTCAACTTCTTCATCCTCCACCACCACCTCTTCCGCCATCGACTCAACAACATGGAGCCAGTACTAGCTCCATCAGACCTGGGTCGATGGCGGACAGGGCAAGGATGGCTAACATACCCATGCAAGAGCCAGCACAAAAGTGTCCAAGATGTGAATCTACCAACACAAAGTTTTGCTACTTCAACAACTACAGCCTCTCTCAGCCCCGGCACTTCTGCAAGACCTGCCGGAGGTACTGGACCCGAGGCGGCGCTTTGAGAAATGTTCCGGTCGGCGGCGGCTGCCGGAGGAACAAGAGGACTAAAGGAACAACCACCAGCAACAACGGCTCCAAGTCACCACCACCGAGCTCTGATCGCGGAGGTCCCACCGTCTCTGGTGGCAGCTTTGCCTCTGAAATCGCAGGCCTAAGCCCTCCGGTGCCCTCGTCGCTGAGATTCATGGCTCCATTAATGCATCATCAGCAACTTGGAGATCACTTTTCAGGAGTTGGTGGCGGTGATTTAGGCCTAAACTACGCCGCAATTTCTGGTCCAATGGGAGGAATGGGTGACTTAAATTTTCACATAGGAAGTGCTTTGCGCAGTGATGTCACCGGTGGCGGCAATGGAGGCAGTTCTCTTCTATCAGCTGCAGGTTTGGAACAATGGAGGGTTCCACAAACACAACAATTTTCTTTCTTGACAGGTTTCGAAGCTTCATCACATGGCCTATACCAATTTGAAAATAGTACTAGTGAGGGTTCTGGATACGGCGGAGGCAGCAGTGGTGGTGGCGGTGCTATTCGGCCGAATAAGGTGTCGACTTTTGCCTCAGTAGTGAAGATGGAAGAAAGTAATAATAATTTGCCAAGGCAGTTTTTGGGGATGAATAATAATTCATCAAGTAATAGTGAGCATTTTGTTCCTGCTTCTTGGACACACCTTTCTGGTTTTACTTCTTCCAATACTACCAATAATCCTCCATAG | 1065 | 0.4911 | MVYTSIPAYIDPVNWHQQQQPNHQQNNTGGTSSQLLHPPPPPLPPSTQQHGASTSSIRPGSMADRARMANIPMQEPAQKCPRCESTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRTKGTTTSNNGSKSPPPSSDRGGPTVSGGSFASEIAGLSPPVPSSLRFMAPLMHHQQLGDHFSGVGGGDLGLNYAAISGPMGGMGDLNFHIGSALRSDVTGGGNGGSSLLSAAGLEQWRVPQTQQFSFLTGFEASSHGLYQFENSTSEGSGYGGGSSGGGGAIRPNKVSTFASVVKMEESNNNLPRQFLGMNNNSSSNSEHFVPASWTHLSGFTSSNTTNNPP* | 355 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Amo04g1247 | 354 | MobiDBLite | consensus disorder prediction | 119 | 165 | - | - | |
Amo04g1247 | 354 | Pfam | Dof domain, zinc finger | 77 | 132 | IPR003851 | GO:0003677|GO:0006355 | |
Amo04g1247 | 354 | ProSiteProfiles | Zinc finger Dof-type profile. | 78 | 132 | IPR003851 | GO:0003677|GO:0006355 | |
Amo04g1247 | 354 | PANTHER | DOF ZINC FINGER PROTEIN DOF3.6 | 6 | 350 | - | - | |
Amo04g1247 | 354 | MobiDBLite | consensus disorder prediction | 17 | 59 | - | - | |
Amo04g1247 | 354 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 6 | 350 | IPR045174 | GO:0003700|GO:0006355 | |
Amo04g1247 | 354 | MobiDBLite | consensus disorder prediction | 131 | 157 | - | - | |
Amo04g1247 | 354 | ProSitePatterns | Zinc finger Dof-type signature. | 80 | 116 | IPR003851 | GO:0003677|GO:0006355 | |
Amo04g1247 | 354 | MobiDBLite | consensus disorder prediction | 17 | 34 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Amo04g1247 | Amo-Chr4 | 58744179 | 58745974 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Amo04g1247 | 1 | 274 | C2C2-Dof Transcription Factor Family | AT2G37590 | 41.158 | 1.61e-51 | 172 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Amo04g1247 | zf-Dof | 8.9e-32 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Amo04g1247 | - | - | aip:107639364 | 602.438 |