Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0848 ATGAAGAGTCATAATTAYCTACTTATATTATTGATTATTGTTGTGATTGTAGTTTTTAATTGTTGTTTCAACATTCGATGTGATTGGAGAGACGAATCTTAYGAAGTCTACGTGAACGGGATTGTTGGTCAATTTCGAGAGAATGTGCCTAACGCTTCCATTATGGTATGCAATTTTCGCGAGGAAAACACTAAAAGCAAGTTGGATAACATATTCTCTAAGCATGAAATTAATCTCATGAACTATCCTTGCCACCACCATGGTTTCCCTATGCTCAAATTGGAGGCCATACATCATTTTCTAAATTCATGTGATAGTTGGCTCTCACATGGGCAAAATAAGGTGTTGTTAATGCATTGYGAGCRTGGTGGCTTGCCAGTTTTGGCCTTCATGTTGGCTGCATTGTTGATTTTCTTGAAACAATATWAAGGGGAGCAGAGGACGTTAGATATGGTTTACAAGCAGGTACGTCGTGATTTTTTACAATCCTTAACAATGGTGAATCCAATCCCTTCCCAATTGCGGTATTTACGATATGTTTCCAAGACCAATATGGCCTTTGATTGGCCTTCATTGGATAGGACACTTAGGTTGGACTACATCATTATGACATTTCTTCCAAACTTTAATGGGAATGGTGGATGTTTTCCAATATTTAGAATTTATGGCGAAGATCCCTTTCTTGTTGACAAGAATCCTAAGATCCTATACTCAACACCAAAGAGTCCCAAAAACATTCAAGCTTATAAACAGGGAGAGCGTGATGATAAAATCAAAGTCAATATCAACTGTCGGATTCAAGGTGATGTGCTGATTGAAAGTGTTAATTTGGATAGTGACTTGGAAAATGAACAGATGATATTCCAAACGATGATTAACACAAATTTCATTAGATCTAATTTGTTGATGCTTAATCGGGAGAAAATTGATATTTTGTGGGATGCAAAAGATCGCTTCCCAAGGGATTTCAAACTAGAGATAACTTTCACAGAGAAAGATGTTGCTCCAAAGACTGAGTCATCCTCTAGCTTTGAGGAAAGGGAGGGATTACCAATTGAAGAATTTACCAAAGCCAAAGAGATTTTTAACCATGGAGATTGGACGAGTCCTAATGATGAAGATCACACAGTAAATGATACTAACACAATCAATGATACCTCAATTTCACCACAAACACCTCCATTGAGGTCTCCCAGAAGTGATAAAAATGTTGATGAGTCTCTTCCTCATCAGTTGCATTCAAAGTCACAAAATCCTAATACTAATGTAACAAGACCTGATTTGTTGCTTTCACAGCAAAAAACCCAACCCCCACCGGATCAAATTAGAGCTCCTCTATCCCCACCAACTCCTCCAAAGAATGAAACATTTGTAAGAGTTGGATCCCCTCTTTCTCCTCCAACTCCAAATGCTACAATGCCTACTACCACCCCACCTCCGCCGCCAACGCCACCCCCGGTTGGAGACCATTACGCTAACAATGGTTTTCCAACTTCATTGTGTATTGGTCGTGGAAAGAATGACACTGGCAATCACACGATGCATTCAATGAGTAACACCAAAAAGTTAAAAACATTGCATTGGTTAAAATTATCTCGAGCAGTGAAAGGAAGTTTGTGGGCTGAGGCACAAAAATCTGGTGAAGCTTCCAAGACACCAGATATTGATATGTCTGAGCTTGAAAATCTCTTCTCAGCAACAACACCAAGTTTAGGCCAAGCAAAGAAGTCAAAGATCCAAAACTTAGTTACGCCAAAATCTGATAAAGTGCAACTGATTGAACATACACGAGCATATAATTGTGAAATCCTTCTTTCAAAAGTGAAAGTCCCGTTGAAGGATTTAATGAGCTCAGTTTTAGCATTAGAAGAGACAGCATTAGATATTGATCAGGTTGAAAACCTGATAAAGTTTTGTCCAACAAAGGAAGAGAAGCAAGTACTTAAGGATTATGACGGAGACAAGGAAAAATTGGGGAGATGTGAACAGTTCTTCTTAGAGTTGATGAAAGTTCCAAGGGTAGAATCCAAGCTGAGAGTTTTTTCATTCAAGATTGAATTCAATACTCAGGCTTCTGACCTTAGAAATAACATCAATATTGTTAATGATGCTGCAGAAGAGGCATGA 2127 0.3836 MKSHNYLLILLIIVVIVVFNCCFNIRCDWRDESYEVYVNGIVGQFRENVPNASIMVCNFREENTKSKLDNIFSKHEINLMNYPCHHHGFPMLKLEAIHHFLNSCDSWLSHGQNKVLLMHCEXGGLPVLAFMLAALLIFLKQYXGEQRTLDMVYKQVRRDFLQSLTMVNPIPSQLRYLRYVSKTNMAFDWPSLDRTLRLDYIIMTFLPNFNGNGGCFPIFRIYGEDPFLVDKNPKILYSTPKSPKNIQAYKQGERDDKIKVNINCRIQGDVLIESVNLDSDLENEQMIFQTMINTNFIRSNLLMLNREKIDILWDAKDRFPRDFKLEITFTEKDVAPKTESSSSFEEREGLPIEEFTKAKEIFNHGDWTSPNDEDHTVNDTNTINDTSISPQTPPLRSPRSDKNVDESLPHQLHSKSQNPNTNVTRPDLLLSQQKTQPPPDQIRAPLSPPTPPKNETFVRVGSPLSPPTPNATMPTTTPPPPPTPPPVGDHYANNGFPTSLCIGRGKNDTGNHTMHSMSNTKKLKTLHWLKLSRAVKGSLWAEAQKSGEASKTPDIDMSELENLFSATTPSLGQAKKSKIQNLVTPKSDKVQLIEHTRAYNCEILLSKVKVPLKDLMSSVLALEETALDIDQVENLIKFCPTKEEKQVLKDYDGDKEKLGRCEQFFLELMKVPRVESKLRVFSFKIEFNTQASDLRNNINIVNDAAEEA* 709
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0848 708 Pfam C2 domain of PTEN tumour-suppressor protein 194 331 IPR014020 -
Amo03g0848 708 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 195 331 IPR035892 -
Amo03g0848 708 MobiDBLite consensus disorder prediction 374 398 - -
Amo03g0848 708 Gene3D - 196 330 - -
Amo03g0848 708 Gene3D Formin, FH2 domain 511 708 IPR042201 -
Amo03g0848 708 ProSiteProfiles C2 tensin-type domain profile. 193 332 IPR014020 -
Amo03g0848 708 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 55 181 IPR029021 -
Amo03g0848 708 SMART PTEN_C2_2 191 331 IPR014020 -
Amo03g0848 708 Pfam Formin Homology 2 Domain 518 707 IPR015425 -
Amo03g0848 708 MobiDBLite consensus disorder prediction 361 516 - -
Amo03g0848 708 ProSiteProfiles Formin homology-2 (FH2) domain profile. 513 708 IPR015425 -
Amo03g0848 708 PANTHER FORMIN-J 11 707 - -
Amo03g0848 708 MobiDBLite consensus disorder prediction 467 488 - -
Amo03g0848 708 SUPERFAMILY Formin homology 2 domain (FH2 domain) 478 707 - -
Amo03g0848 708 MobiDBLite consensus disorder prediction 410 440 - -
Amo03g0848 708 Gene3D Protein tyrosine phosphatase superfamily 10 187 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0848 Amo-Chr3 17370718 17381961 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0848 459 707 Protein tyrosine phosphatase (PTP) family AT5G58160 59.200 4.58e-80 276
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo03g0848 - - ahf:112775940 1358.2