Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo03g0144 ATGGTTTTGCCCATATTTTTCTCAACCTTGCTCATAGGAGGACTACTAGCCTCTAAACTCATTTGGCAATGGTTCACACAAAAAATTTTATCTTTGCATAATAAGCACCCCAAACTCCCTCCTGGCCCACCAAGGTTGCCAATCGTTGGCAATCTTCTTCAATTAGGGCAACTTCCACATAGAGATTTAGCATCTTTATGCGATAAATATGGACCCTTAGTTTATCTTAAATTGGGTAACATTGATGCAATTACTACTAATGATCCTGATATCATACGTGAAATACTTGTTCGCCAAGATGATGTTTTTGCCTCTCGTCCACACACTCTTGCCGCCGTTCATTTAGCCTATGGGTGTGGGGATGTTGCATTGGCCCCTTTAGGCCCACATTGGAAGCGAATGAGAAGAATTTGCATGGAACATTTGTTAACCACAAAGAGACTTGAATCCTTCTCAAAACATCGTCAAGATGAAGCTAACCACCTTGTTAAGGATGTTTGGGCTAAAGCCCAAACTGGAAAGCCCATTAACTTGAGAGAAGTGTTGGGTGCATTTTCAATGAACAATGTCACTAGAATGTTGCTAGGAAAGCAATATTTTGGATCTAAATCAGCAGGCCCACAAGAGGCTATGGATTTCATGCACATAACCCATGAATTGTTTTGGTTATTGGGTGTGATATACTTAGGTGACTACTTGCCAATTTGGAGGTGGGTGGATCCTTATCAATGTGAAAGGAAAATGAAGGAAGTGGAAAAGAAAGTGGATGATTTTCACACCAAAATTATTGAAGAACATAGAAAAGCAAGAATTGAGAAGAAAAAGAAGAATAATATGGGAATGGAAGATGATGAAGAAATGGATTTTGTGGATATTTTACTATCACTGCCAGGCGAAGATGGAAAAGCGTGTTTGGATGATACAGAAATCAAAGCTTTGATTCAGGATATGATAGCTGCAGCAACAGATACTTCGGCTGTGACGAATGAATGGGCAATGGCTGAAGTAATCAAACATACCCATGTCCTTCGTAAAATTCAAGAAGAGCTTGATGCCGTAGTGGGTCCCAATAGAATGGTGATGGAATCTGATTTAGTCCACCTTAATTACCTGCGATGCGTTGTACGTGAAACATTTCGTATGCACCCAGCAGGGCCTTTCCTCATTCCACATGAATCTCTTCGTGACACCACCATCAACGGCTTTGATATACCTGCAAAGACACGTGTCTTCATTAACACCCATGGTTTGGGTCGTAACACTAAGATTTGGGACAATGTTGAGGAGTTTAGGCCCGAAAGGCACTTGCTAGTTGACGGGGGTAGGGTTGAGATTAGCCATGGAGTGGATTTCAAAATACTACCCTTTAGTGCTGGAAAAAGGAAATGTCCTGGTGCACCCCTTGGAGTCACCTTGGTTTTAATGGCTTTGGCTCGACTTTTTCATTGCTTTGATTGGGCTCCGCCTCGTGGCTTAAATCCTCAAGATATTGATACAAGAGAAGTCTACGGAATGACCATGCCTAAGGTTGAGCCCTTGATTGCTTTTGCTACTCCTCGCTTAGCAAAACATTTGTATGTTAACTAA 1587 0.4152 MVLPIFFSTLLIGGLLASKLIWQWFTQKILSLHNKHPKLPPGPPRLPIVGNLLQLGQLPHRDLASLCDKYGPLVYLKLGNIDAITTNDPDIIREILVRQDDVFASRPHTLAAVHLAYGCGDVALAPLGPHWKRMRRICMEHLLTTKRLESFSKHRQDEANHLVKDVWAKAQTGKPINLREVLGAFSMNNVTRMLLGKQYFGSKSAGPQEAMDFMHITHELFWLLGVIYLGDYLPIWRWVDPYQCERKMKEVEKKVDDFHTKIIEEHRKARIEKKKKNNMGMEDDEEMDFVDILLSLPGEDGKACLDDTEIKALIQDMIAAATDTSAVTNEWAMAEVIKHTHVLRKIQEELDAVVGPNRMVMESDLVHLNYLRCVVRETFRMHPAGPFLIPHESLRDTTINGFDIPAKTRVFINTHGLGRNTKIWDNVEEFRPERHLLVDGGRVEISHGVDFKILPFSAGKRKCPGAPLGVTLVLMALARLFHCFDWAPPRGLNPQDIDTREVYGMTMPKVEPLIAFATPRLAKHLYVN* 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo03g0144 528 Gene3D Cytochrome P450 26 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS P450 superfamily signature 320 337 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS P450 superfamily signature 373 384 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS P450 superfamily signature 454 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PANTHER CYTOCHROME P450 703A2-RELATED-RELATED 29 527 - -
Amo03g0144 528 Pfam Cytochrome P450 40 510 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PANTHER CYTOCHROME P450 703A2-RELATED 29 527 - -
Amo03g0144 528 PRINTS E-class P450 group I signature 67 86 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS E-class P450 group I signature 91 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS E-class P450 group I signature 309 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS E-class P450 group I signature 329 355 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS E-class P450 group I signature 372 390 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS E-class P450 group I signature 413 437 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS E-class P450 group I signature 453 463 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 PRINTS E-class P450 group I signature 463 486 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 SUPERFAMILY Cytochrome P450 40 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Amo03g0144 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 456 465 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo03g0144 Amo-Chr3 2646436 2648320 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo03g0144 1 527 EF-hand Containing Proteins AT1G01280 74.858 0.0 784
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g2322 13 39987280 39989771 Amo03g0144 03 2646436 2648320 hybridization