Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo01g2794 ATGGGAAAGATAAATTACTTTGCCTACATTATTATTCAATCTTGGTATCTCATGGTCATAATTACAGTTGCTGAGTTTGAAAGTGTTGACTCTTCTGTTCAACCACTCCTAGGAGGAAAGAAATTGATCATTGGGATACCCTTGAAAACTGGTTTCACTGAATTCGTGGAAGCCAAGCTGGATCCTACAACACTCCAATTGGTCCACGTCAGTGGCTACTCCATTGATATCTTTTCTGCCACGGTTGACTATATCAAACGCTACTCCCATTTCAATGTCTCTTACGAGTTTCGGCCATTCATCAAAAATGGAACAGGACAAAGTGCTGGCTCTTATGACAAACTTGTTCAACAGGTTTCTAAACACCAGTATGATGCGGTGGTGGGAGACGTATCAATTGTAGCTGAGAGAACAAGGTATGTGGATTTCACGTTACCATATGCAGAGTCAGGTGTGAGGATGCTGGTGCGAGTTGGATATGGCGGCCGCGGTATAAACATGTGGATATTTCTGCGGCCATTTAGTTGGGATCTATGGTTGTCCATCATTCTAGTCTGTGCTTTTATAGGAGCTGCAATACGATTCATGGAACGTCGTAACATTCATAATAATAATAATAGTCATGAAGAAGAATCTGCACAAGGCTCTCCACCTCCCCAACAACTCAAAGGGATATCAATATTATGGCTTCCAATTGATCAACTCTTCCTTCCTCAGAGAGAATCAGTAGGCAAGAATTGCTCCAAGTTTGTATTGGTGGTATGGTTGATATTGGGATTTGTGTTGATGCAAAGCTACACGGCAAACTTGTCATCRATGTTGACCGTGGACCAATTGCAGCAAAYCTATCCAAGTGTTGATGATTTGAGAACAYYTGGTYYCAACATAGGGTACCCAACGGATTCCTATCTATCTGAGGTMCTGGTTGACAAATTCAAGTTRGATAYATCAAGGCTAAAGAATCTGACAAAAATGGAAGATTATCAGAAAGCTTTAGACAAAGGAACTCCAAAAGGCGGCGTTGATGTTATATTTGAGGAGATACCATACATCAAGATGTTCCTCAAAAAATATGGTTCCAAGTATAACATGGTTGGGCCTCACTATCGTACTGATGGGCTTGGCTTTGCGTTTCCAATTAACTCCAACTTAACATCTTACTTTTCAAGAGCTATATTGAACGTTACCCAGAATGATAGTTTTATGCAACCGATTGAGATGAAGTATTTTGGAAGCAGTAACTATGATTTCGAAGATGATTCTTATGATCAATTATCAACGTCAACATCATCAGATGGTACTCCTAGCCTTAACTCTCAGAGTTTTGCGGGCTTGTTCATCATCACAGGAATTGCCACATTTTTAGCTTTGGTGGTTTCTGAAAGCAACATCTGGAGAAAACCCGTAACACTAGCCAAAGTCTACAGTCAAAAGTTTCTTCTAATGTCTCCTAGTTGGGCAAAATCTAAYCAATCTATGGATGTTTCTACAAAGCAAGGGAATAAAATATGTTCTATCAGTGAACCAAATAGCATTCCTGAAAGTCCATCAAGGTTTCCAAAGTCTAATCTTGCTCTAGACACAGTTGTATAG 1593 0.3974 MGKINYFAYIIIQSWYLMVIITVAEFESVDSSVQPLLGGKKLIIGIPLKTGFTEFVEAKLDPTTLQLVHVSGYSIDIFSATVDYIKRYSHFNVSYEFRPFIKNGTGQSAGSYDKLVQQVSKHQYDAVVGDVSIVAERTRYVDFTLPYAESGVRMLVRVGYGGRGINMWIFLRPFSWDLWLSIILVCAFIGAAIRFMERRNIHNNNNSHEEESAQGSPPPQQLKGISILWLPIDQLFLPQRESVGKNCSKFVLVVWLILGFVLMQSYTANLSSMLTVDQLQQXYPSVDDLRTXGXNIGYPTDSYLSEVLVDKFKLDXSRLKNLTKMEDYQKALDKGTPKGGVDVIFEEIPYIKMFLKKYGSKYNMVGPHYRTDGLGFAFPINSNLTSYFSRAILNVTQNDSFMQPIEMKYFGSSNYDFEDDSYDQLSTSTSSDGTPSLNSQSFAGLFIITGIATFLALVVSESNIWRKPVTLAKVYSQKFLLMSPSWAKSNQSMDVSTKQGNKICSISEPNSIPESPSRFPKSNLALDTVV* 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo01g2794 530 Gene3D - 309 415 - -
Amo01g2794 530 Pfam Ligand-gated ion channel 412 452 IPR001320 GO:0015276|GO:0016020
Amo01g2794 530 Gene3D - 36 160 - -
Amo01g2794 530 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 12 483 - -
Amo01g2794 530 Gene3D - 165 308 - -
Amo01g2794 530 SUPERFAMILY Periplasmic binding protein-like II 17 412 - -
Amo01g2794 530 SMART GluR_14 41 412 IPR001320 GO:0015276|GO:0016020
Amo01g2794 530 Pfam Bacterial extracellular solute-binding proteins, family 3 99 411 IPR001638 -
Amo01g2794 530 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 12 483 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo01g2794 Amo-Chr1 98801760 98804069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo01g2794 39 459 Ion Channels AT5G11210 35.867 1.43e-73 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo01g2794 K05387 - aip:107641909 992.645