Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju13g1442 ATGCAGGAATCTAGAGACCCTGCAATTAAGCTTTTCGGCCAGAAGATTCCTGTGCCCGGTGAGAGCGAGCTTCATGCCGGAGCCGTCTCCGTCGCCGATGATGCCGAAGACTATGAATCGCCGGGCTACATGGAGGCGGACAGACAAGAAGGAGGAGATTGTGATGATGGAGAACAACACAATTCAGAAGAGGAGAAGAACGATGAAGATGACAAGGATCATTCAGCTGGAATCACTACAGACAAAAAGAGAGAAGCTGATAATCCTCCAAACGCAGAAGAGACTAAGAATCCAGACTCACAGGCTGAGGCTGGTGTGATCCCAAAAACACCCTCCATAGATGAAGAGATTGCAAAATCAAAAGGTGACAACGGCTCAGAGAAGGAGAAAAGTGATGGAGCTAACCCACAGGAAAAAACCCTGAAGAAGCCAGATAAATTACTTCCATGTCCTCGCTGCAACAGCATGGACACCAAATTCTGCTATTACAATAACTACAACATCAATCAGCCTCGTTATTTCTGCAAAGCCTGCCAAAGATACTGGACAGCAGGTGGCACCATGAGGAATGTACCAGTAGGGGCAGGTCGGCGAAAGAATAAGAACTCTTCCTCCCATTATCGCCACATCAGCATTTCAGAGGCTCTACAAGCAGCTAGAATTGATGCTCCAAATGGGACTCATCATCATCTTCCTGCGTTAAATGGAAATGGCAGAGTCCTCAGTTTTGGATTAGATGCACCTATTTGTGATTCTATGGCATCTGTCCTGAATCTTGCAGAGAAAAAGGTCCTAAATGGTGTGAGAAACAGCTTTCAAAGCAAAGCTGCTGAAACTGGTGGTGGTGGTGATGACTGCTCAAGTGCATCTTCCATTACAGTTTCAAATTCTATGGAAGAAAGTGGCAAAAGTGTTTCCCAAGAATCATTGCTCAGAACTAATGGTTTTTCTCCTCCAATCCCGTGTCTTCCTGGTGTTCCCTGGCCTTATCCTTGGAATGCTCCAGTTCCTTCACCTCCCTTATGCCCTCCAGGATTTCCCTTATCATTCTATCCTGCAGCCTTTTGGAACTGTGGCGTGCCAGGAAATTGGAATATACCCTGGTTTCCCCCACACCCTTCTGCTCAAAACCCACTATCTTCTTCCACTACCAGTACTAGTCCTAATTCTCCAACATTAGGGAAGCATTCTAGGGATGATGATGTGATCAGAACAGACAACTCACAGAAAGAAGAGCCATCATCAAAACAGAGAAATGGTTGTGTTTTGGTTCCTAAAACCTTGAGAATTGATGATCCAAGTGAAGCTGCAAAGAGTTCCATATGGGCAACTCTAGGAATCAAGAATGAATCAGCCAGTGGAGGAGGCATGTTTAAGGCCTTCCAATCAAAGAAGGATGAGAAGGATCATGTCATTAAAACCTCGCCGGTGTTGCGGGCTAACCCTGCAGCCTTATCTAGATCCCTTAACTTCCATGAGAACTCCTGA 1488 0.4577 MQESRDPAIKLFGQKIPVPGESELHAGAVSVADDAEDYESPGYMEADRQEGGDCDDGEQHNSEEEKNDEDDKDHSAGITTDKKREADNPPNAEETKNPDSQAEAGVIPKTPSIDEEIAKSKGDNGSEKEKSDGANPQEKTLKKPDKLLPCPRCNSMDTKFCYYNNYNINQPRYFCKACQRYWTAGGTMRNVPVGAGRRKNKNSSSHYRHISISEALQAARIDAPNGTHHHLPALNGNGRVLSFGLDAPICDSMASVLNLAEKKVLNGVRNSFQSKAAETGGGGDDCSSASSITVSNSMEESGKSVSQESLLRTNGFSPPIPCLPGVPWPYPWNAPVPSPPLCPPGFPLSFYPAAFWNCGVPGNWNIPWFPPHPSAQNPLSSSTTSTSPNSPTLGKHSRDDDVIRTDNSQKEEPSSKQRNGCVLVPKTLRIDDPSEAAKSSIWATLGIKNESASGGGMFKAFQSKKDEKDHVIKTSPVLRANPAALSRSLNFHENS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju13g1442 495 MobiDBLite consensus disorder prediction 375 421 - -
Alju13g1442 495 MobiDBLite consensus disorder prediction 1 148 - -
Alju13g1442 495 MobiDBLite consensus disorder prediction 41 92 - -
Alju13g1442 495 ProSitePatterns Zinc finger Dof-type signature. 150 186 IPR003851 GO:0003677|GO:0006355
Alju13g1442 495 MobiDBLite consensus disorder prediction 284 309 - -
Alju13g1442 495 MobiDBLite consensus disorder prediction 114 146 - -
Alju13g1442 495 PANTHER CYCLIC DOF FACTOR 2 1 495 IPR045174 GO:0003700|GO:0006355
Alju13g1442 495 ProSiteProfiles Zinc finger Dof-type profile. 148 202 IPR003851 GO:0003677|GO:0006355
Alju13g1442 495 MobiDBLite consensus disorder prediction 394 413 - -
Alju13g1442 495 MobiDBLite consensus disorder prediction 276 309 - -
Alju13g1442 495 MobiDBLite consensus disorder prediction 375 393 - -
Alju13g1442 495 Pfam Dof domain, zinc finger 146 202 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju13g1442 Alju-ChrAlju13 33009940 33012595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju13g1442 1 493 C2C2-Dof Transcription Factor Family AT3G47500 49.020 1.09e-129 382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju13g1442 zf-Dof 2.5e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2706 06 54069598 54073117 Alju13g1442 13 33009940 33012595 ECH
Alju13g1442 13 33009940 33012595 Alju13g1442 13 33009940 33012595 ECH