Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g1537 ATGATGTCACAGGAAAATAATTCTCCTTCAAAGCAGGCTGCGGCTGAGAAAGAAGACAGTAGCCAGAGCTCCGGCGGCGGGGGGAAGAAGGCCTCCGCAAGGCCACCAGAACAAGGTCTCAAGTGTCCAAGGTGTGACTCACCCAACACCAAATTCTGTTACTACAACAATTACAGCCTGACGCAGCCAAGGCATTTCTGCAAGACTTGCCGAAGGTACTGGACCAAGGGAGGAGCTTTACGCAACGTTCCGATTGGCGGCGGCTGCCGGAAGAACAAGAAGGTTAAGTCGTCGTCTTCACGGCTTCCCGGCGACCCCAAGGACCCCGGATTCCCGGGGGAGCTCGGCGGCTTCAAGTTCTTCCACAGCCTTTCACCTTCACTGGATTTTCACCTTGGTGGGTCCCTACCATTCCCTAAACTTAACCATCTTCCACTTCCAACCACATATAACACAGTCTCTTCCTTTGGGGATGTTCAAGCAGCCACCTTTGATCCATCTGGAAGCTCAAATTCTATGATTAATTTCAATTACCCAGGAGGAGGATTCAGCAGTGTAATTCAGGGTATGAGTTCTATGAACGTGAACAGCAACCTCGCTTCTTCAATTGAATCCTTGAGTTCTGTTAATCAAGACTTGCACTGGAAGCTACAGCAACAGAGGCTAGCGATGCTGTTTGGCGGCGATGATAACGGCCAAATCCAGAAAGACGACAGTGTTTCAGCGGTTACTACTCATCATCTTGAGAACCAAATCCAGAGACCACAACCCATTTTGTTTCAGAATCTTGAGATTTCAAAGGCTGAGATTAATTCCGTGGCTGCTGGTAATAATTCCAGAAAAGAAGGCACAACTAGTGGTGAAGCCCCTACAGAGTGGTTTTTTGGGAATTCGTTTGCTTCTTCTGTGATTCCTACGCACACAAGCACCAGTAGTGGTGCGAATAATGGAGGCCATGATAATGCAACCAATAACTGGAGTTCTGTTCATGCTTGGGGTGATGTGCAGCAGCAATATAATGCTTTGCCCTAG 1032 0.4845 MMSQENNSPSKQAAAEKEDSSQSSGGGGKKASARPPEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKVKSSSSRLPGDPKDPGFPGELGGFKFFHSLSPSLDFHLGGSLPFPKLNHLPLPTTYNTVSSFGDVQAATFDPSGSSNSMINFNYPGGGFSSVIQGMSSMNVNSNLASSIESLSSVNQDLHWKLQQQRLAMLFGGDDNGQIQKDDSVSAVTTHHLENQIQRPQPILFQNLEISKAEINSVAAGNNSRKEGTTSGEAPTEWFFGNSFASSVIPTHTSTSSGANNGGHDNATNNWSSVHAWGDVQQQYNALP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g1537 343 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 21 229 IPR045174 GO:0003700|GO:0006355
Alju12g1537 343 MobiDBLite consensus disorder prediction 1 42 - -
Alju12g1537 343 MobiDBLite consensus disorder prediction 86 110 - -
Alju12g1537 343 Pfam Dof domain, zinc finger 38 94 IPR003851 GO:0003677|GO:0006355
Alju12g1537 343 ProSitePatterns Zinc finger Dof-type signature. 42 78 IPR003851 GO:0003677|GO:0006355
Alju12g1537 343 MobiDBLite consensus disorder prediction 1 28 - -
Alju12g1537 343 MobiDBLite consensus disorder prediction 306 326 - -
Alju12g1537 343 ProSiteProfiles Zinc finger Dof-type profile. 40 94 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g1537 Alju-ChrAlju12 36643629 36644660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g1537 2 343 C2C2-Dof Transcription Factor Family AT5G65590 42.458 3.32e-65 207
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju12g1537 zf-Dof 1.3e-32 No_clan