Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju12g0147 ATGATTCAAGAACTGTTGGGTGCTTCTTCTGGTTTCATATCAACCGGAGATAGGAATAAAATCTCCGTTAACGCCCCTTCTGTTCTTGCACCTCCCTTATCCTCTCCTTCTCTACCTTCTTCCACGGCCGGCGCCGGCGCCGCCACAGCCACCTCTGGAGCTTCTGCTGCTGCTGGTACCTCGTCGAATTCAGAGCACCAGAACCTGAGGTGTCCGAGATGCGATTCATCAAACACAAAATTTTGTTACTACAACAACTACAATCTCACGCAGCCTCGCCACTTCTGCAAGACATGTCGCCGGTACTGGACCAAAGGAGGTGCTCTGAGAAACGTTCCAATCGGAGGTGGTTGCCGGAAAAACAAGAGCGTCATCAGCCCGTCGTCGTCATCCAACTCCGTGGCGGCGGCAAAGACAAGTGTGGCTGTGGCGGGTAACAAGATGAAAACGGCTGCGTCTGAGCTTGCAATAATAAGTAGGCCAGGACTTGGCGGCGGCTTCGATCATCATCATCAGGAGCTTCCGGCAAGCCCGATTTTGTGGGGTACGCCGCAAAATTCTCATCTGATGGCTTTGCTGAGAGCTAGCCACCAGAACCATAACCCTAACCCTAGCCCTTGTCCTCCAATACCTAATATTTCTGTGAAAGAAGGGAACTTGTTGAGATCCCACATGGTGACTGATCCAATAATGGTTTCTAATAGCCTCTTCATCAATAATGTTCCTCCAAACTCTAACTTTGATCCTTCACTTGATCTCACGAGCTCTTTCTGGAGAAACAACAATCTCGATCACCATCAACAATCACAAAATGGAGGTTTTGTGTTTGGCGGCGGCGACCACCAAAACAGTAGTGGGATCCAAGAATTCTACCAGAGGCTCAGGTCGTCTTCTTCATCTTCACCTAACTATTGTAATGACGACTCACCATCTTCGCTGTTTCTAAGCAACATGTCTTCTTCTTCATCTTCTTCCTCTGTGGCCATTGTGGAGTCAACTCCAGCTAGTAATGGTGGGAGTGGAATTGGATTGGGGTACTGGAATAACCAACCTCTTTTCTGGTCTGATCTTCCCACGACCAATGGGGCACATCCGTAA 1098 0.49 MIQELLGASSGFISTGDRNKISVNAPSVLAPPLSSPSLPSSTAGAGAATATSGASAAAGTSSNSEHQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKSVISPSSSSNSVAAAKTSVAVAGNKMKTAASELAIISRPGLGGGFDHHHQELPASPILWGTPQNSHLMALLRASHQNHNPNPSPCPPIPNISVKEGNLLRSHMVTDPIMVSNSLFINNVPPNSNFDPSLDLTSSFWRNNNLDHHQQSQNGGFVFGGGDHQNSSGIQEFYQRLRSSSSSSPNYCNDDSPSSLFLSNMSSSSSSSSVAIVESTPASNGGSGIGLGYWNNQPLFWSDLPTTNGAHP 365
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju12g0147 365 ProSiteProfiles Zinc finger Dof-type profile. 69 123 IPR003851 GO:0003677|GO:0006355
Alju12g0147 365 ProSitePatterns Zinc finger Dof-type signature. 71 107 IPR003851 GO:0003677|GO:0006355
Alju12g0147 365 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 61 290 IPR045174 GO:0003700|GO:0006355
Alju12g0147 365 Pfam Dof domain, zinc finger 67 123 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju12g0147 Alju-ChrAlju12 1831596 1832693 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju12g0147 49 134 C2C2-Dof Transcription Factor Family AT5G65590 65.116 7.98e-36 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju12g0147 zf-Dof 1.9e-32 No_clan