Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g2035 ATGGTTTTTCCTTCCATGCATCCTTATCTTGATCCAGCCAACTGGCAACAACAGCAACCTAATAATCACCAGATTGGAAGCAGCAGTACCGGCCCAGGCTCTCAGTTTCTTCCTCCTCCGCCACCACCTGTTCAGTCTCATGGCGGAGCTAGTGGCTCCGGCTCCATCAGGCCGGGTTCCTTGGCTGATAGGGCCCGGATGGCCAACATACCGATGCCAGAGGCGGCGCAGAAATGCCCTCGCTGCGATTCCACCAATACTAAGTTTTGTTACTTCAACAACTACAGCCTCTCTCAGCCTCGCCACTTCTGCAAGACCTGTAGAAGGTACTGGACCCGAGGTGGGGCCCTGCGAAGTGTCCCCGTCGGCGGGGGATGCCGGAGGAACAAGAGAAGTAGCAAAGGAAGCAGCTCAAAGTCTCCGCCAGTGAGCTCAGATCGCCAGACAGGCAGTGCTAATTCAAACAACTCTTCCAACACTTCTTCTTCGGCAGCAGATATAGTAGGCCTTTCGTCTCAGGTTCCATATCTGAGGTTCACGCCTCCTTTGCATCAACTAACTGAGTTCGGATCTGGAGATATGGGATTGAACTATGGTTTGAGTAATTATAGCGCAGCGGGAGGAGCAGCTGACTTAGGTTTCTATATAGGAACCGCTTTGGCCGGAGGAGCAGGCGGCAGCGGCAGCTCCGTCGTCTTATCCGCTGCCGGGTTGGAGCAGTGGCGGATGCCAGAAACACAACAATTTCCCTTCTTAACTGGTTTGGAAGCTCCGCCTCAACTGTACCAATTTGAAAGTGGATCAGCTGCAGTGCCGGGATATGGCGGCGGCGGCGGCGCAAGTCAACTCCGGCCAAAGGGGCCAACTGGGGCGATAACTCAACTAGCTTCAGTGAAAATGGAAGACCATAATAATCACCAGGAACTAAATTTGTCAAGGCACTTCTTGGGGATAAATAATAATAATTCAACAAATCATGAGCAGTATTGGAATACCACTACAGCCCGTAATTCTAATACTTCTGCTGCTAATTGGACTGAGCTTTCTGGGTTTATCTCTTCTTCCACTCCCAGCAACAATCCGCCATAG 1089 0.5161 MVFPSMHPYLDPANWQQQQPNNHQIGSSSTGPGSQFLPPPPPPVQSHGGASGSGSIRPGSLADRARMANIPMPEAAQKCPRCDSTNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRSVPVGGGCRRNKRSSKGSSSKSPPVSSDRQTGSANSNNSSNTSSSAADIVGLSSQVPYLRFTPPLHQLTEFGSGDMGLNYGLSNYSAAGGAADLGFYIGTALAGGAGGSGSSVVLSAAGLEQWRMPETQQFPFLTGLEAPPQLYQFESGSAAVPGYGGGGGASQLRPKGPTGAITQLASVKMEDHNNHQELNLSRHFLGINNNNSTNHEQYWNTTTARNSNTSAANWTELSGFISSSTPSNNPP 362
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g2035 362 ProSitePatterns Zinc finger Dof-type signature. 79 115 IPR003851 GO:0003677|GO:0006355
Alju11g2035 362 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 57 287 IPR045174 GO:0003700|GO:0006355
Alju11g2035 362 MobiDBLite consensus disorder prediction 121 164 - -
Alju11g2035 362 Pfam Dof domain, zinc finger 76 131 IPR003851 GO:0003677|GO:0006355
Alju11g2035 362 ProSiteProfiles Zinc finger Dof-type profile. 77 131 IPR003851 GO:0003677|GO:0006355
Alju11g2035 362 MobiDBLite consensus disorder prediction 135 164 - -
Alju11g2035 362 MobiDBLite consensus disorder prediction 11 60 - -
Alju11g2035 362 MobiDBLite consensus disorder prediction 11 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g2035 Alju-ChrAlju11 41773116 41774377 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g2035 1 332 C2C2-Dof Transcription Factor Family AT5G02460 40.779 9.02e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju11g2035 zf-Dof 1.2e-31 No_clan