Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju11g0324 ATGTATATGAGTTGCTCAGTACAGCCACAGATTCTCGGGAGGTTAAATATTGAATTGAGAAAGGAGATGGAAAGGAATATTATAGAAGGAAGCAACAATAATAATAACAATTCAGGCACAAAAGAAGTAGTAGGGTTAGGAGGAGAGAAGAAGGGAAGGCCACAAGAACAACTGAACTGTCCAAGGTGCAATTCAACAAACACAAAGTTCTGCTACTACAACAACTATAGCCTCACACAACCCAGATATTTCTGCAAGACTTGCAGAAGGTACTGGACTGAAGGTGGGTCCCTCAGGAATGTCCCTGTTGGTGGAGGTTCCAGAAAGAACAAGAAGCTCTTCACTAATAATCCTAATTCATCTTCTTCAGCAAAGGTTCTTCCTGACTTGAATCCACCAACAACAAGTACTTCTTCTTCTTCTCAGAACCCTAAATTGTTAATGCAAGGAGGCCAAGATCTTAACCTGGCTTTCCCACCTGTTAATGTGGACAATTATCATCATGGGCTTACTTATCAAAGCTCTTCTTCTTCTACTTCTGCTTTGGCGCTTCTAAGGGCAGGCATGAATAATAACAATAATCAGGCTTTTGTTCATAATCCAATACTGATGATGCCAAACTCAAATAATAATGATAATAATAATGTGCTTTTCCCAGCTTCTGGTGGGTTTATAAGTCCCATTATGCATGAGGTTAAGCCAGGAAGCCTTGGATTTTCAGTAGTGGATAATCATCAAGGGCTTCGAGGAAGCAGATATGGTAGTGTTCATCATCATCAACAGAATAGTGATGATAGTAATGTTAATGCTGGTGGAGGAAGATTATTGTTTCCTTTTGGAGATGTGAAGCAGATTCCAGAAGAAAATAAAGAACATGCAGCTGGGAATAATTCATCTTCTTCTGGGTATTGGACTGGTATGATTGGTGAAGGATCCTGGTAA 942 0.3981 MYMSCSVQPQILGRLNIELRKEMERNIIEGSNNNNNNSGTKEVVGLGGEKKGRPQEQLNCPRCNSTNTKFCYYNNYSLTQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKKLFTNNPNSSSSAKVLPDLNPPTTSTSSSSQNPKLLMQGGQDLNLAFPPVNVDNYHHGLTYQSSSSSTSALALLRAGMNNNNNQAFVHNPILMMPNSNNNDNNNVLFPASGGFISPIMHEVKPGSLGFSVVDNHQGLRGSRYGSVHHHQQNSDDSNVNAGGGRLLFPFGDVKQIPEENKEHAAGNNSSSSGYWTGMIGEGSW 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju11g0324 313 MobiDBLite consensus disorder prediction 99 147 - -
Alju11g0324 313 ProSiteProfiles Zinc finger Dof-type profile. 58 112 IPR003851 GO:0003677|GO:0006355
Alju11g0324 313 ProSitePatterns Zinc finger Dof-type signature. 60 96 IPR003851 GO:0003677|GO:0006355
Alju11g0324 313 Pfam Dof domain, zinc finger 56 112 IPR003851 GO:0003677|GO:0006355
Alju11g0324 313 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 42 211 IPR045174 GO:0003700|GO:0006355
Alju11g0324 313 MobiDBLite consensus disorder prediction 110 147 - -
Alju11g0324 313 MobiDBLite consensus disorder prediction 251 270 - -
Alju11g0324 313 MobiDBLite consensus disorder prediction 255 269 - -
Alju11g0324 313 MobiDBLite consensus disorder prediction 29 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju11g0324 Alju-ChrAlju11 3262587 3264000 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju11g0324 50 313 C2C2-Dof Transcription Factor Family AT3G61850 47.552 1.30e-64 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju11g0324 zf-Dof 2.8e-33 No_clan