Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g2178 ATGACTCCAAACACTTCAATTTCGCGCATTCAATTTATTATAGTCTTAGAAATACACGGGCCTATTTGGTTGCAAATGTTTTGGATTGTTGTTAGAACAACACAGATCATAAAGAAGATGATCCAGGAACTGTTGAGCGGTGCTGGTATCATTTCAGGCGAAAGCAAAATCTCCAATAATGCACCAGCCGGAGTTTTAGCACCTTTCATCATTACACCTCATAGTTCTGTTCCTTCTTCGTCTTCATCATCTCACCCTTCCACCACCACCACTACTTCTACTGCCACCGCCGCAGCCGCAAATTCCGAGAACCAGAATCTGAGGTGCCCGCGGTGTGATTCTTCCAACACAAAGTTCTGTTACTACAACAACTACAACCTCACTCAGCCTCGCCATTTCTGCAAGACGTGTCGCCGGTACTGGACCAAAGGTGGTGCTCTCAGGAATGTTCCGATCGGCGGTGGCTGCCGGAAGAACAGGAACGTCGCCGCCGCCTCCAACTCCGTCGTGAAGACGAGCGTGGCTAAGATGAAAACAGCTGCCCCGTCGGAGCTCGAGAGGTCGGTGCTCGGCGTGGCTGCCGGGTTCATCGACCACCACGACCTTTCTCCAAACCCAATCTTATGGGGCTCGCCGCAAAGTAGTCCTCATGTGTTAGCTCTGCTAAGAACTGGTCAAAACCCTAACCATAACCCTAACCCTAACCCTAGTGTTCCCATATCCGTCAATGCTGTTATTAAGGAAGAAGGGAATAACTTGATGGGGTCCCACACGGCGACTGAGCCAGTGGTTGGAAATGGGTTGATTCATGGTCGAGCCCTAAACTTTGATTCTGTTGGTCAATTTCCAACACTTGGGCTATGCAGCTCTATCTGGAGAAGCAGTAATAGTAGTAATAACAATAATAATAATCAAGATGGGTTTGTAGTTGGAGAACATGGAATTCAAGAACTGTACCAGAGGCTGAGATCATCATCGTCACAAGCAGCTAATTATTGTGGCGACAATAATAACTCGTCACAGGGGTTAGGGAACATGGCTTCTTCTTCTTCACATGCATCTTCTTCTTTATCAGCTAATTTGGGGACAGGTTCAGTGGTTTCTGGGGATGATCAATTGGGGTACACCTGGAATCCAACACTTTCGTGGTTTGATCTTTCCACCACCAATAATGGTACTTTATATCCTTAA 1191 0.4702 MTPNTSISRIQFIIVLEIHGPIWLQMFWIVVRTTQIIKKMIQELLSGAGIISGESKISNNAPAGVLAPFIITPHSSVPSSSSSSHPSTTTTTSTATAAAANSENQNLRCPRCDSSNTKFCYYNNYNLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNRNVAAASNSVVKTSVAKMKTAAPSELERSVLGVAAGFIDHHDLSPNPILWGSPQSSPHVLALLRTGQNPNHNPNPNPSVPISVNAVIKEEGNNLMGSHTATEPVVGNGLIHGRALNFDSVGQFPTLGLCSSIWRSSNSSNNNNNNQDGFVVGEHGIQELYQRLRSSSSQAANYCGDNNNSSQGLGNMASSSSHASSSLSANLGTGSVVSGDDQLGYTWNPTLSWFDLSTTNNGTLYP 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g2178 396 MobiDBLite consensus disorder prediction 76 100 - -
Alju09g2178 396 ProSiteProfiles Zinc finger Dof-type profile. 107 161 IPR003851 GO:0003677|GO:0006355
Alju09g2178 396 MobiDBLite consensus disorder prediction 329 349 - -
Alju09g2178 396 ProSitePatterns Zinc finger Dof-type signature. 109 145 IPR003851 GO:0003677|GO:0006355
Alju09g2178 396 Pfam Dof domain, zinc finger 105 161 IPR003851 GO:0003677|GO:0006355
Alju09g2178 396 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 94 331 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g2178 Alju-ChrAlju09 45184670 45186883 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g2178 79 216 C2C2-Dof Transcription Factor Family AT1G51700 44.755 3.81e-34 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju09g2178 zf-Dof 1.2e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju09g2178 09 45184670 45186883 Alju09g2178 09 45184670 45186883 ECH