Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g1207 ATGTCGGCTCCAGCGGCGACGTCCAAAGACGACAGCCAAGGCTCAGGCGGCCGGAAAAGCGCCTCATCGGCGGCGGCGGGGAGGCAGTTAGAGCAAGGGCTAAAGTGCCCGAGATGTGACTCACCCAACACTAAATTCTGCTACTACAATAATTACAGCCTGACTCAGCCGAGGCATTTCTGCAAGACTTGTCGGAGATACTGGACAAAAGGTGGAGCCTTGCGTAACGTTCCGATTGGCGGCGGTTGCCGGAAGAACAAGAAACTGAAATCATCATCATCCTCATCAAGGCTCTCAAATGACGGTGGTTTCTCCCCTTCTCTGGATTTTAACCTCGGTGGTGGAGCCGCCGCCGCCGCTAGCTTCTTACCCTTCCCTAGGCTGAACGATCACCCTCCACCTTTCAACCTCGAAGTAACAACCCCGAGTTCTTTCGATATCGGATTTAATTATTCATTTAACGGCGGTGTCATTCACGGCATGAGCTCACCAATAAACGTTCAGAGTAGCCTTGCTTCTTCGATTGAGTCTCTGAGCTCTATAAACCAAGACCTGCACTGGAAGCTGCAGCAGCAGAGACTAGCGATGCTATTTGGAGGGGATAGTACTACTACTGCTACTAGTTTAAAAGATAACCGAGGAGCCACCATTTCAGCCTTTAATCTCGAGAACCAGAGTCATCATCAGAAATCACCTACACAACCTATTTTGTTTCAGAATCTTGAGATTTCTTCGAAGCCGGCAGAGATCTGTCCGGTGGTCGTCGGAAATTCGAGAAGAGATGCATCCACAGGGTGGTTCTTCGGGAGCCCGTATCCTTCGGTGACGACGCCGACCACGACAAGCAGTGGTGGTGGAGGTAATAATAATGGGAATGGCAATGGAAGTAGTAGCTGGAGTCTTCAAGGTTGGGGTGATGTGCAGCAGCAATACAGTGCTTTGCCCTAG 948 0.5074 MSAPAATSKDDSQGSGGRKSASSAAAGRQLEQGLKCPRCDSPNTKFCYYNNYSLTQPRHFCKTCRRYWTKGGALRNVPIGGGCRKNKKLKSSSSSSRLSNDGGFSPSLDFNLGGGAAAAASFLPFPRLNDHPPPFNLEVTTPSSFDIGFNYSFNGGVIHGMSSPINVQSSLASSIESLSSINQDLHWKLQQQRLAMLFGGDSTTTATSLKDNRGATISAFNLENQSHHQKSPTQPILFQNLEISSKPAEICPVVVGNSRRDASTGWFFGSPYPSVTTPTTTSSGGGGNNNGNGNGSSSWSLQGWGDVQQQYSALP 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g1207 315 MobiDBLite consensus disorder prediction 269 302 - -
Alju09g1207 315 Pfam Dof domain, zinc finger 32 88 IPR003851 GO:0003677|GO:0006355
Alju09g1207 315 MobiDBLite consensus disorder prediction 1 27 - -
Alju09g1207 315 ProSiteProfiles Zinc finger Dof-type profile. 34 88 IPR003851 GO:0003677|GO:0006355
Alju09g1207 315 ProSitePatterns Zinc finger Dof-type signature. 36 72 IPR003851 GO:0003677|GO:0006355
Alju09g1207 315 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 210 IPR045174 GO:0003700|GO:0006355
Alju09g1207 315 MobiDBLite consensus disorder prediction 267 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g1207 Alju-ChrAlju09 35424235 35425182 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g1207 1 315 C2C2-Dof Transcription Factor Family AT5G65590 39.216 1.13e-59 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju09g1207 zf-Dof 8.6e-33 No_clan