Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju09g0887 ATGGAAACCAAATTCTGTTATTTTAACAACTACAATGTTAATCAACCTCGCCACTTCTGTAAGAACTGCCAGAGATACTGGACTGCTGGAGGAACCATGAGAAATGTGCCTGTTGGTGCTGGTCGCCGCAAGAACAAGAGCTCTTGCGCTTCTCATTACCAACACATAGTGATTCCTGAGTCTCTTCTAACAGTAGCCAATGCAAATGGATTACATAACACTATCTTGAAAAATGGAGCATCAGTATTGACCTTTGGCTCATCAGATTCTGCCATATGTGATTCCATGGCTTCTGTTTTGAACCTTGCAAAGTATATCCAGAATGGTGTTCTGAATGGAGTTCATGTATCCAAGCAGAATATTGCTGTTTCTTGTAGTAGAGAATATAATGGTGATGACCATTCAGTTGGAGCTTCTGTTATAACTTTGACTTCATCAGAGAAGAAAGCCAATGTTGGTTCCCAAAAATCTGTAAATAAAGCCTATGAAGATTTCCCCCCTCAATTACAATGCATTCCAAGTTCTCCATGGCAATCTCCATGGAATTCTCTCATGCCTCCTCCTCCTGCATTATCACCGGGTTATCCAGTGTCATTCTATCCCACGCCTGCTTATTGGGGTTGTGCATTACCAGCCTCCTTAAACATAACATGTGTTTCTCCACAATCTTCTATGAAAAACCCTTCCCCTTGGTCCTCCTCCGATTCGCTCACCTCGAGGAAGCACTTGAGGGATGGAAGCATCATCACTCAAGCCAACTCTCAGAAAGAAAAGCCAGATGCAGAGAGTAAGGACTCAGAAAATGGTTTTTTGATCCCCAAGACACTAAGAATTGATGATCCAACTGAGGCTGCAAAGAGTTCTATATGGTCAACACTAGGGATCAAGAATGAACAGGCTAGTTCCCTCAATGGTTGTGTGGGTCTCTTCAAGGCAATTCCATCTAAGGGAAATAACCAGAATTATCATCACATGGTTGAGGTATTGCCCGCGCTACAAGCGAACCCGGCAGCCTTATCACGGTCGGTTGCTTTCCATGAGCAGCAGGCCTAA 1053 0.4349 METKFCYFNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKSSCASHYQHIVIPESLLTVANANGLHNTILKNGASVLTFGSSDSAICDSMASVLNLAKYIQNGVLNGVHVSKQNIAVSCSREYNGDDHSVGASVITLTSSEKKANVGSQKSVNKAYEDFPPQLQCIPSSPWQSPWNSLMPPPPALSPGYPVSFYPTPAYWGCALPASLNITCVSPQSSMKNPSPWSSSDSLTSRKHLRDGSIITQANSQKEKPDAESKDSENGFLIPKTLRIDDPTEAAKSSIWSTLGIKNEQASSLNGCVGLFKAIPSKGNNQNYHHMVEVLPALQANPAALSRSVAFHEQQA 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju09g0887 350 ProSiteProfiles Zinc finger Dof-type profile. 1 47 IPR003851 GO:0003677|GO:0006355
Alju09g0887 350 PANTHER CYCLIC DOF FACTOR 2 1 348 IPR045174 GO:0003700|GO:0006355
Alju09g0887 350 MobiDBLite consensus disorder prediction 246 269 - -
Alju09g0887 350 Pfam Dof domain, zinc finger 1 47 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju09g0887 Alju-ChrAlju09 27270419 27271471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju09g0887 1 348 C2C2-Dof Transcription Factor Family AT3G47500 45.278 1.99e-68 219
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju09g0887 zf-Dof 1.5e-25 No_clan