Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0282 ATGGAGTCGTCAGGGTGGCTCAGACGCAAGATTATCGAGGGAGCACCCTCTTGCCCTCGCTGTGCCTCCTCCAACACCAAGTTCTGTTACTTCAACAACTACAGCTTCTCCCAACCCAGGTACTTCTGCAAATCCTGTCGCCGCTACTGGACCAAAGGCGGCTCCCTCAGCAATGTCCCAGTCGGCGGCGCTTCTCGTAAGTCTCGCCCTCCCAAACCCTCCCGCCTTTCCCCTCTAACCTCACGCCTCTTCATCGGTGTCATTTCCTGTTCTCACGACACACCTAATTCCGACGACCCCCAATCCGGCGGCTCCCATATTGACATGGCCCTTCTGTTCTCCAAGTTTTTTAACCCCATGAATGGATCCTCCAAGTCTGGCACACCGGAAAGCGTGGAAGCCCAGAACGACGAGACTCGAGGGACGTCTGATGCAGTCACAGGCTGCGATCATGTAGATCTGACAGGGGGGATTTCTCAACAAGAGGCAGCTCAGAGTTTTTCGGGACATGAGTTGGAGGGCTTGTTCGGTGGGGATGAAGCAAATCAAGATGTGTTATGGCCTGATGTTACGACGTCGTCTGCGTTCGCCTGGCAGCCTCCAAGCCCTATGATGGCATTTCCACAGGAGTTGGTGTACTCGATTCCCTTCCACGACGACGATCAACTCCCAATCACTTCTACAGTGCTTCCTTCTATTTAA 702 0.5399 MESSGWLRRKIIEGAPSCPRCASSNTKFCYFNNYSFSQPRYFCKSCRRYWTKGGSLSNVPVGGASRKSRPPKPSRLSPLTSRLFIGVISCSHDTPNSDDPQSGGSHIDMALLFSKFFNPMNGSSKSGTPESVEAQNDETRGTSDAVTGCDHVDLTGGISQQEAAQSFSGHELEGLFGGDEANQDVLWPDVTTSSAFAWQPPSPMMAFPQELVYSIPFHDDDQLPITSTVLPSI 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0282 233 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 142 IPR045174 GO:0003700|GO:0006355
Alju08g0282 233 Coils Coil 233 233 - -
Alju08g0282 233 ProSiteProfiles Zinc finger Dof-type profile. 16 70 IPR003851 GO:0003677|GO:0006355
Alju08g0282 233 MobiDBLite consensus disorder prediction 123 148 - -
Alju08g0282 233 Pfam Dof domain, zinc finger 17 69 IPR003851 GO:0003677|GO:0006355
Alju08g0282 233 MobiDBLite consensus disorder prediction 123 143 - -
Alju08g0282 233 ProSitePatterns Zinc finger Dof-type signature. 18 54 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0282 Alju-ChrAlju08 2076004 2076705 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0282 13 119 C2C2-Dof Transcription Factor Family AT3G52440 58.879 4.12e-37 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju08g0282 zf-Dof 4.2e-30 No_clan