Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju08g0222 ATGGACACAGCTCAGTGGGCACAGGGGATTGGAGTGGTTAAACAGCCTGTGGAGGAAGGTAATTCAATTCCAAAGGCTCCTCCTCCTGGTATGAGCGAAAGGAAGGCAAGGCCTCAGAAAGATCAAGCTTTGAACTGCCCAAGGTGCAATTCAACCAACACTAAGTTCTGCTACTACAATAACTATAGCCTCTCTCAGCCAAGATACTTCTGCAAGACTTGTAGAAGGTACTGGACGGAAGGTGGGTCCCTCAGAAATGTTCCCGTCGGAGGAGGCTCCCGGAAGAACAAGCGATCTTCAACAACTTGTTCAAAGAAGCTTCCTGATCTGAACCCCAAGATCCAGCAAGGCCAAGATCTTAACTTAGCATGCCCACCACCACCACCGCCGCCCGATCAGGACTATAACAATAGCATATCCAAATTTATGGAGGTTCCTTTTAGTACCCAAGACAAGACTACAACTACAGCTTCTCATCACCATGATCAGTTATCCTCCATGGAGCTTCTGAAAACTGGAATTCCGTCGTCAAGGACTTTGTGTTCTTTGATGCCTATGACGTCCGCGTCGGATTCTTCTGCTTCAGCAATGTATAATTCAAGTGGGTTTCCTAATTTGCAAGATTTGAAGCCTCCTCCAGCTGGGCTTAGTTTCAGTCTTGAAGGGTTTGTAAATAATGGGTACGGAGGTATTTCTGGGATGCACGAGGGCGATGATGGTGCGAGGTTGTTGTTTCCTACTGAGGATTTGAAGCAAGGTGTTGCAAGTAGTACCGATCATTTTGAGCACAATAGAAGCCATGCGGATTCAACTGGGTTTTGGAATGGCATGTTAGGTGGAGGATCCTGGTAA 852 0.4695 MDTAQWAQGIGVVKQPVEEGNSIPKAPPPGMSERKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRSSTTCSKKLPDLNPKIQQGQDLNLACPPPPPPPDQDYNNSISKFMEVPFSTQDKTTTTASHHHDQLSSMELLKTGIPSSRTLCSLMPMTSASDSSASAMYNSSGFPNLQDLKPPPAGLSFSLEGFVNNGYGGISGMHEGDDGARLLFPTEDLKQGVASSTDHFEHNRSHADSTGFWNGMLGGGSW 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju08g0222 283 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 29 184 IPR045174 GO:0003700|GO:0006355
Alju08g0222 283 Pfam Dof domain, zinc finger 41 98 IPR003851 GO:0003677|GO:0006355
Alju08g0222 283 MobiDBLite consensus disorder prediction 93 112 - -
Alju08g0222 283 MobiDBLite consensus disorder prediction 1 39 - -
Alju08g0222 283 ProSiteProfiles Zinc finger Dof-type profile. 44 98 IPR003851 GO:0003677|GO:0006355
Alju08g0222 283 MobiDBLite consensus disorder prediction 85 112 - -
Alju08g0222 283 ProSitePatterns Zinc finger Dof-type signature. 46 82 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju08g0222 Alju-ChrAlju08 1641747 1643053 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju08g0222 31 283 C2C2-Dof Transcription Factor Family AT3G61850 44.565 4.89e-62 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju08g0222 zf-Dof 1.1e-33 No_clan