Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1861 ATGATGTTCGGTACTTGTGAATTCTCGGCTGCGTCCTCTGATGCTAAGCCATTCCCCAGGTGGAAGCCCCACCACGTGGAGCCTCCTCCTCCTTGCCCTCGCTGTTCTTCTTCCAACACCAAATTCTGTTACTACAACAACTACAGCTTGTCCCAGCCCAGATACTTGTGTAAATCTTGCCGTCGCTACTGGACCAAAGGCGGCTTCCTCCGCAACGTCCCCATCCGCGGTGGTTCCCGCAAATCTCGCCGTCCTAAGACCACCCGGCTCCCGCCAAGCCACCGTGTTTCCAACAACCTTGCTCCTACTGACTCCGACAAGGCTGACACGTGTCAAACCAACGGATCCGATATTGACATGGCCGTGGTCTTTGCTAATTACTTGAGCCCTGGTAACGATGGGCCTCAGCCGTCCGATCCGGTGGTAGAGGGAGAGGGCATGCTTTTTGCTCGAGACGAGTCGTCGGTGATGAGTGGAATTGGCTTAGAGTGGGAGAGCTTGTTAGTTGGTGGTGACGGCGGAGAAGTAGTCGTCGAAGATGATGTTTTCTGCTTGTCTGATGCTACGACGTCGTCTTCGTCGTCTGTCATGTGGCAACCACCACCTCCTCTGATGCAGTTGCCGGAGGAGTTTGACAATCCCTTGCCTTTCAATTATGATGAGGCTGCTCAATTTCCTATCATCGCCGATTATTCCTGGAATTGGAATTCCTTCGATTTTCCTACTTTGCAGGCCTTCACTTCATCAAGGCCTCTTGATTCTTAA 765 0.5255 MMFGTCEFSAASSDAKPFPRWKPHHVEPPPPCPRCSSSNTKFCYYNNYSLSQPRYLCKSCRRYWTKGGFLRNVPIRGGSRKSRRPKTTRLPPSHRVSNNLAPTDSDKADTCQTNGSDIDMAVVFANYLSPGNDGPQPSDPVVEGEGMLFARDESSVMSGIGLEWESLLVGGDGGEVVVEDDVFCLSDATTSSSSSVMWQPPPPLMQLPEEFDNPLPFNYDEAAQFPIIADYSWNWNSFDFPTLQAFTSSRPLDS 254
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1861 254 Pfam Dof domain, zinc finger 31 84 IPR003851 GO:0003677|GO:0006355
Alju07g1861 254 MobiDBLite consensus disorder prediction 91 109 - -
Alju07g1861 254 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 25 130 IPR045174 GO:0003700|GO:0006355
Alju07g1861 254 MobiDBLite consensus disorder prediction 74 109 - -
Alju07g1861 254 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Alju07g1861 254 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1861 Alju-ChrAlju07 44955103 44955867 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1861 21 130 C2C2-Dof Transcription Factor Family AT3G52440 53.982 4.27e-35 124
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju07g1861 zf-Dof 5.1e-30 No_clan