Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju07g1774 ATGGACACAGCTCAGTGGGCACAGGGGAATATTGGAGTGGTTAAACCTATGGAACTAGGTTCATCAAATCCAAAGCCAGCTCCTATGTTGGAGAAAAAGGCAAGGCCACAGAAAGATCAAGCCTTGAACTGTCCAAGGTGCAATTCAACCAACACAAAATTCTGTTACTACAACAACTATAGCCTCTCTCAGCCCAGATACTTCTGTAAGACTTGTAGAAGGTATTGGACTGAAGGTGGCTCTCTCAGGAATGTTCCTGTTGGTGGTGGTTCCAGAAAGAACAAGAGACCTTCTTCTAATTCTTCTTCATCTTCTTCCTCAACATCTTCGAAGAAGCTTCCAGAACCTTCTCCTCCTTCCCAGAATCCGACCACCAGCAACAACAACAACAAGATCCGCCAGGCCCAAGATCTTAACTTGGCATACCCAGAGCGAGGCACTGGGATATTACAACAACATGAGATTTCTGGAAATTCTAATAATTCTTCGAGGGGTTTAATGAGTTCCTTGATGCCCATGTCGGTTTCATCAGATGGAAGCATGATTTATGAAAATAATAGCAATAATTCAGCTCCTCATCCTCATCATGGTGGGTTTCCTTTGGAGTTCAAGCCTCATCATCATCATCATCAAGGTCTTAATTTTAGCTTCGAGGGGTTTGAGAATAATAATGGGTTAATTGGAAGTAGTGGTCTTCATCATCATCATCAGGGAATGCAATTGGGTAATTCTTCAGCTATTGGTGGTGCAAGGATCTTGTTTCCCATTGAAGATTTGAAGCAGCACGTGCCAAGCACTACCACTACTAGTCATGAGTTTGATCAGCAAAATAATCGAGCAACAGGCCATGGAGATCCAAGTGGGTTTTGGAATGGCATGTTAGGTGGAGGAGCATGGTAG 900 0.4344 MDTAQWAQGNIGVVKPMELGSSNPKPAPMLEKKARPQKDQALNCPRCNSTNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSNSSSSSSSTSSKKLPEPSPPSQNPTTSNNNNKIRQAQDLNLAYPERGTGILQQHEISGNSNNSSRGLMSSLMPMSVSSDGSMIYENNSNNSAPHPHHGGFPLEFKPHHHHHQGLNFSFEGFENNNGLIGSSGLHHHHQGMQLGNSSAIGGARILFPIEDLKQHVPSTTTTSHEFDQQNNRATGHGDPSGFWNGMLGGGAW 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju07g1774 299 ProSiteProfiles Zinc finger Dof-type profile. 42 96 IPR003851 GO:0003677|GO:0006355
Alju07g1774 299 MobiDBLite consensus disorder prediction 15 40 - -
Alju07g1774 299 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 31 206 IPR045174 GO:0003700|GO:0006355
Alju07g1774 299 MobiDBLite consensus disorder prediction 80 130 - -
Alju07g1774 299 ProSitePatterns Zinc finger Dof-type signature. 44 80 IPR003851 GO:0003677|GO:0006355
Alju07g1774 299 MobiDBLite consensus disorder prediction 264 284 - -
Alju07g1774 299 MobiDBLite consensus disorder prediction 264 299 - -
Alju07g1774 299 Pfam Dof domain, zinc finger 39 96 IPR003851 GO:0003677|GO:0006355
Alju07g1774 299 MobiDBLite consensus disorder prediction 93 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju07g1774 Alju-ChrAlju07 43980565 43982164 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju07g1774 1 299 C2C2-Dof Transcription Factor Family AT4G24060 39.359 1.32e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju07g1774 zf-Dof 1.5e-33 No_clan