Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2805 ATGGAGCCTGGGTTGGTTTTGAGCGACATGCATTCCATCGGGGGAGGTGGGTTTTTTGGTGCCGGGGCTGCCGGTGCAGACAGGAGGCTCAGACCTCACAGAAACGACAACCAGAACCATCAGTCGTTGAAGTGCCCGAGGTGTGACTCCCTCAACACCAAGTTCTGCTACTATAACAACTACAACCTCTCTCAGCCGCGCCATTTCTGCAGGAGTTGCCGGAGATACTGGACCAAGGGCGGTGTCCTCCGTAACGTCCCCGTCGGCGGCGGTTGTCGGAAGGCTAAGCGGTCCAAGCCCAAGAACTCTCCCTCCGCCGCTGCGACAACAGCACCACCGCCCGCCCCGTCGTCATCGCAACAGAAGCGCGGGCGTAAGGCGTCCAACTCTCATTCCAGCAGCGAAAACTCCAGTCTTACCGCGGCCACCGCCGCGACCGTCACCACAGAAGCGGTTTCAGCTCCTTCATCTAACTCCGCGTCCAATAACTCTTTGGACAATCTTCAGGATTCGAGCCTCTTCGTCCATTCCAGGCCGAAGCCTAGCTCGGAGCCAGGCGTCACCGAAGAAGGAGTAGACTCCGGGATTTTCTCGGAGATAGAGAACTTGACGAGCCTGATCGCACCGACTAACGAGAACATGGCTTTTGGATACGGGAACATCACCGACGCGTCGTCGTTCCAGCTGTGCGGCCAGTGGCAGAAAGGGATGAACACGAGCGATCGTCGTTATCAGGAGTTGAAGTGGCCGGAGATGACGACGATGGGATCGTTGATGGAGGAGACGGTGGCGGGGGATTGGCGAGGGAGCACGGAAGATCAAGGTTTGTTTGATGTCGGCAACACAGTAGATGAAGGTGTGTGGAGTCGCAATCAGTGGAATGAAGACAATTCGAGTCTTTTTCATCTACCTTGA 915 0.5661 MEPGLVLSDMHSIGGGGFFGAGAAGADRRLRPHRNDNQNHQSLKCPRCDSLNTKFCYYNNYNLSQPRHFCRSCRRYWTKGGVLRNVPVGGGCRKAKRSKPKNSPSAAATTAPPPAPSSSQQKRGRKASNSHSSSENSSLTAATAATVTTEAVSAPSSNSASNNSLDNLQDSSLFVHSRPKPSSEPGVTEEGVDSGIFSEIENLTSLIAPTNENMAFGYGNITDASSFQLCGQWQKGMNTSDRRYQELKWPEMTTMGSLMEETVAGDWRGSTEDQGLFDVGNTVDEGVWSRNQWNEDNSSLFHLP 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2805 304 MobiDBLite consensus disorder prediction 87 143 - -
Alju06g2805 304 Pfam Dof domain, zinc finger 41 97 IPR003851 GO:0003677|GO:0006355
Alju06g2805 304 ProSitePatterns Zinc finger Dof-type signature. 45 81 IPR003851 GO:0003677|GO:0006355
Alju06g2805 304 ProSiteProfiles Zinc finger Dof-type profile. 43 97 IPR003851 GO:0003677|GO:0006355
Alju06g2805 304 MobiDBLite consensus disorder prediction 102 143 - -
Alju06g2805 304 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 34 205 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2805 Alju-ChrAlju06 54998874 54999788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2805 27 304 C2C2-Dof Transcription Factor Family AT5G60850 39.649 3.18e-50 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju06g2805 zf-Dof 4.5e-33 No_clan