Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju06g2706 ATGCAGGAAACAAAAGACCCTGCAATTAAGCTCTTCGGAAAGAAGATTCCATTGCAGGGTGAAGCCCCGAATCCTGCCATTTCCGGCAACTATTCTGTCTCACATGTCGCCGTTGATGCCGCGAAAGGAGGAGGAGGGGACGACGGACGACAGAAAAAACGACAAGACGACGAAGCAGAGAAGGAATCTGAGATTGGAAAAGTCACAGTGAGCCCTGAAGAGAAAGAGACTGAAGAAACTGCAAAATCCTCAGAGAATGACGATGGAACAAACTCACAAGAGAAAATCCTGAAGAAGCCAGATCAAGTGTTTCCATGTCCTCGATGCAACAGCATGAACACAAAGTTCTGTTACTTTAATAACTACAGCATCAATCAGCCTCGCCATTTCTGCAAATCCTGTCAAAGATACTGGACAGAAGGTGGCACCATGAGGAACGTTCCAGTAGGAGCAGGACGAAGAAAGACCAAAAACAACAACTCCTCTCATTATCGCTATATCACCATTAATGAAGCTCTTCGTGTATCCAGAATTAGTGCCCCTAATGGAACGAATGGCAAAGTTCTCAGATTTGGATCATATTCTCCCATGAATTCTGTCCTGACTCTTGCAGAGAACAAAATTGTTTCTAAAAGCACCCGAAATGATATTCCCTGGCTTGTCCCTCCAGGTTTTCCTCCTCCCCTGTTATCCAATCATCCTGCAGCTTTTCGGAATGCGAATAGTCCGAGAGAAGAAGAGAGGAAACAGAGGAGTGGCTCTGTTTTGGTGCCTAAAACTTTGAGGATTGATGACCCAAGTGAGGCTGCTAAGAGTTCAATATGGGCAAACTTAGGAATAATGAAGGAATCATGGAATGGTGGAAGTATGTTTGATGGGTTTCGATCAAGTAAAGATGGGAAGAATCAGAAGCATCATTGGGGTTCGATTCTGTATATTTTGTGGTCATTAGAAGAAGCAAATGATGGTAGTCTCTGCCTTTTTAGTGTTAGGTCGAAGAGTTTGAACGTGTTAGGACTTAGGATAATACTAATATGTGAGATTCCCATGGAAAGTACTGTTTATGTTTATGTAGAAAAAGAGACCAGATCTACCATATTTTCTCTTGAGAAGACGTATACGAACCGCGTGATGATACATCACTGGTCGACTCCTGGCAAGAGAATATCAGTCTTTTCTTCGTCTTCTTCAAATTGTGTTCTGACCAATCTTTCCAAGAAATCAAACAAATTCTCCAAGAAAATTAGGAACCTAGCGGAGGAGGGTCGATGA 1272 0.4285 MQETKDPAIKLFGKKIPLQGEAPNPAISGNYSVSHVAVDAAKGGGGDDGRQKKRQDDEAEKESEIGKVTVSPEEKETEETAKSSENDDGTNSQEKILKKPDQVFPCPRCNSMNTKFCYFNNYSINQPRHFCKSCQRYWTEGGTMRNVPVGAGRRKTKNNNSSHYRYITINEALRVSRISAPNGTNGKVLRFGSYSPMNSVLTLAENKIVSKSTRNDIPWLVPPGFPPPLLSNHPAAFRNANSPREEERKQRSGSVLVPKTLRIDDPSEAAKSSIWANLGIMKESWNGGSMFDGFRSSKDGKNQKHHWGSILYILWSLEEANDGSLCLFSVRSKSLNVLGLRIILICEIPMESTVYVYVEKETRSTIFSLEKTYTNRVMIHHWSTPGKRISVFSSSSSNCVLTNLSKKSNKFSKKIRNLAEEGR 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju06g2706 423 PANTHER CYCLIC DOF FACTOR 2 217 304 IPR045174 GO:0003700|GO:0006355
Alju06g2706 423 ProSitePatterns Zinc finger Dof-type signature. 106 142 IPR003851 GO:0003677|GO:0006355
Alju06g2706 423 Coils Coil 401 421 - -
Alju06g2706 423 ProSiteProfiles Zinc finger Dof-type profile. 104 158 IPR003851 GO:0003677|GO:0006355
Alju06g2706 423 Pfam Dof domain, zinc finger 102 158 IPR003851 GO:0003677|GO:0006355
Alju06g2706 423 MobiDBLite consensus disorder prediction 45 95 - -
Alju06g2706 423 MobiDBLite consensus disorder prediction 231 257 - -
Alju06g2706 423 MobiDBLite consensus disorder prediction 1 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju06g2706 Alju-ChrAlju06 54069598 54073117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju06g2706 1 301 C2C2-Dof Transcription Factor Family AT5G62430 41.071 8.09e-61 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju06g2706 zf-Dof 2e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju06g2706 06 54069598 54073117 Alju13g1442 13 33009940 33012595 ECH
Alju06g2706 06 54069598 54073117 Alju06g2706 06 54069598 54073117 ECH