Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Alju05g1771 | ATGCAAGACCCAACGGCATTTCAGCCGATGAAACCCCAATTTCCTGAACAAGAACAGCTTAAATGTCCGCGTTGTGATTCTACCAACACCAAATTCTGCTATTATAACAATTATAATCTCTCCCAGCCACGCCATTTTTGCAAGAATTGCCGAAGGTATTGGACCAAAGGCGGTGCTCTTCGAAACATACCAGTCGGTGGTGGGAGCAGGAAGAACACGAAACGATCGTCGTCGTCGACCACTACCAAACGCCCTCCGGCTGCTTCTTCTACTTCAACATCACCTTGTCCTGCATCGGTTTCGGTTTCCTCAACAGCTCGTCCGGATCCTGACCCGATCCGGTTTTATGCCAACCCGAGTGGTCCCATGAACACTGGTGGCAGTTTCAGTTCCCTTCTGGCGTCAACTGTGCATTGGGGTGGTTTGTGGGCGGGTCTGAATTCAAACGGGTCTGGTTTGAGAATGATGCAACTGAATGAATTTGGGGAGAACGTGGGTTCTGGCCATATGAAGAACTCGGATTCGGGTCGAAACCCAGGGCTGGAAAGGCAGAGCAATGGTAATTCAGAGAGCTTTCTGGGTAAGCAAAATGTTGATTCAAGCTGTTGGAATGGTAGTAGCAATGGGTGGTCTGATCTTGCAATATATACACCAGGCTCAAGCTACCAGTAG | 672 | 0.4911 | MQDPTAFQPMKPQFPEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSSSTTTKRPPAASSTSTSPCPASVSVSSTARPDPDPIRFYANPSGPMNTGGSFSSLLASTVHWGGLWAGLNSNGSGLRMMQLNEFGENVGSGHMKNSDSGRNPGLERQSNGNSESFLGKQNVDSSCWNGSSNGWSDLAIYTPGSSYQ | 223 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Alju05g1771 | 223 | MobiDBLite | consensus disorder prediction | 61 | 119 | - | - | |
Alju05g1771 | 223 | MobiDBLite | consensus disorder prediction | 69 | 106 | - | - | |
Alju05g1771 | 223 | ProSitePatterns | Zinc finger Dof-type signature. | 22 | 58 | IPR003851 | GO:0003677|GO:0006355 | |
Alju05g1771 | 223 | PANTHER | DOF ZINC FINGER PROTEIN DOF1.4-RELATED | 14 | 188 | IPR045174 | GO:0003700|GO:0006355 | |
Alju05g1771 | 223 | MobiDBLite | consensus disorder prediction | 166 | 198 | - | - | |
Alju05g1771 | 223 | ProSiteProfiles | Zinc finger Dof-type profile. | 20 | 74 | IPR003851 | GO:0003677|GO:0006355 | |
Alju05g1771 | 223 | Pfam | Dof domain, zinc finger | 18 | 74 | IPR003851 | GO:0003677|GO:0006355 | |
Alju05g1771 | 223 | MobiDBLite | consensus disorder prediction | 164 | 198 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Alju05g1771 | Alju-ChrAlju05 | 49075835 | 49076506 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Alju05g1771 | 11 | 142 | C2C2-Dof Transcription Factor Family | AT1G51700 | 60.000 | 1.89e-47 | 153 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C2C2-Dof | Alju05g1771 | zf-Dof | 2.5e-33 | No_clan |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Alju05g1771 | 05 | 49075835 | 49076506 | Alju05g1771 | 05 | 49075835 | 49076506 | ECH | |
Alju11g0634 | 11 | 7165016 | 7165609 | Alju05g1771 | 05 | 49075835 | 49076506 | PCT |