Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju05g0377 ATGGTTTTTACTTCAATTCCTCCTTATCTTGATCCAGCCAACTGGCAACAACAGCAAAGTAATCACCACCACACAGGCGCTCTCGCCGGTGGTGGTGGTTTGAGCTCTCAGCATCATCATCAGCAGCAACAGCTTCTTTCTCCGCCACACCCTCCTCCGCCTGCGCTGCCTCCACCGCAGCCTCATGGAGGAGGAGGGACGGGTTCGATCAGGCCGGGTTCGATGGCTGATCGAGCCCGGATGGCGAACATACCCGTGCCGGAGGCCGCTCTGAAATGTCCAAGGTGTGAATCATCCAACACCAAGTTTTGCTACTTCAACAACTACAGTCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGTCGGAGGTACTGGACCCGTGGCGGCGCCCTGAGGAATGTGCCTGTCGGAGGAGGATGTCGGAGGAACAAGAGATCAAGCAAAGGAAGCAGCTCCAAGTCACCGGCGAGTTCAGATCGTCAAGCCGGAAGCACTAGTTCAACCAACTCCGTTTCTTCTAACAGTAATTCCGCCGGAGACCTAATAGGCCTCACTCCTCACGCGCCACCTCTGAGATTCATGTCTCCCTTACTCGCCGATTTCGCCGCTGTCGGTGGGGACATGGGGTTAACCTACGGCGTAAATTATAACGCAATTTCAGCACCAATGGGAGGAATAGTCAGCGACTTAAATTTCCAAATAGGAAGTGCTTTTGGCGGAGGCGGAGGAGGAAGTGGCAGCGGCGGGACCACCACAGTCGCGGCTGGAAGCAGCGGCGGGTCTATCTTATTCGCTCCGGGTTTAGAGCAATGGCGTGTGCCACAAACACAGCAATTTCCTTTCTTGGCGGGACTTGAAGGTTCACATGGATTGTACTCTTTTGATGGTACCGGCGGAGAAGGACTGGGATATGGCGGCATGAGTCTCCGGCCAAAGGCAGTGTCATCCTCATCGGCTTCCGGGTTGATAACTCAGCTGGCTTCAGTGAAAATGGAAGACAATAACAACAACAATAATAATAATCTGAATTTGTCAGGCCAATTTCTGGGAAGTGATCAGTATTGGGGTACTAGTGGTGGTGGAGGTTCTACTTCTGCTTGGACTGATCTTTCTGGGTTTAGCTCATCTTCAACTACTAGCAATCCACTATAG 1152 0.526 MVFTSIPPYLDPANWQQQQSNHHHTGALAGGGGLSSQHHHQQQQLLSPPHPPPPALPPPQPHGGGGTGSIRPGSMADRARMANIPVPEAALKCPRCESSNTKFCYFNNYSLSQPRHFCKTCRRYWTRGGALRNVPVGGGCRRNKRSSKGSSSKSPASSDRQAGSTSSTNSVSSNSNSAGDLIGLTPHAPPLRFMSPLLADFAAVGGDMGLTYGVNYNAISAPMGGIVSDLNFQIGSAFGGGGGGSGSGGTTTVAAGSSGGSILFAPGLEQWRVPQTQQFPFLAGLEGSHGLYSFDGTGGEGLGYGGMSLRPKAVSSSSASGLITQLASVKMEDNNNNNNNNLNLSGQFLGSDQYWGTSGGGGSTSAWTDLSGFSSSSTTSNPL 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju05g0377 383 MobiDBLite consensus disorder prediction 135 178 - -
Alju05g0377 383 Pfam Dof domain, zinc finger 90 145 IPR003851 GO:0003677|GO:0006355
Alju05g0377 383 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 44 174 IPR045174 GO:0003700|GO:0006355
Alju05g0377 383 MobiDBLite consensus disorder prediction 357 383 - -
Alju05g0377 383 MobiDBLite consensus disorder prediction 149 178 - -
Alju05g0377 383 ProSitePatterns Zinc finger Dof-type signature. 93 129 IPR003851 GO:0003677|GO:0006355
Alju05g0377 383 MobiDBLite consensus disorder prediction 46 61 - -
Alju05g0377 383 ProSiteProfiles Zinc finger Dof-type profile. 91 145 IPR003851 GO:0003677|GO:0006355
Alju05g0377 383 MobiDBLite consensus disorder prediction 13 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju05g0377 Alju-ChrAlju05 5914080 5915458 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju05g0377 1 376 C2C2-Dof Transcription Factor Family AT2G37590 37.913 1.10e-58 192
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju05g0377 zf-Dof 2.5e-32 No_clan