Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1323 ATGAATATTCAAGAAGGCGGCGGTGAAGGCGGTGCTGGCGGAGGAGGAGGAGGTGGGAATGACCAATCTCAGCCACAGCCACAGCAGCAGCCGCCGCCGCCGCAGAGATGCCCTCGATGTGACTCTGTGAACACCAAGTTCTGTTACTACAACAACTACAGCCTCTCGCAGCCAAGGTACTTCTGCAAAACGTGTAAAAGGTACTGGACCCATGGCGGATCGTTGCGAAACATACCCATCGGTGGTGGTTGCCGGAAGGGAAAGCGGACCAAAATGTCATCCTCGGCTTCTTCGTCATCAGCCGCCGCCCTACAGCTGTTGAGCCGCCCATCGCAGCTGCAACCTACGCAACCAAACCTGATGATGACCTCCCCAGCTTCACGCGTTTTGGTTGGTCGTTCTTCTGCGGAGGCGGCGGTGGCGGCTCCAGGGGTTCCGTTGATCAGTTCCTACTATCAAGGTGGTGGGTATCTTTCACCTCCGGCTGCAATTCACTCCCAAAACCCATTATCACAGCCATTATTCAATGTGTCTTCTATGAATCTTGCTCCTTCGTCCAATCTGGGTCTTCATCCTTGGTTCAATAATGCTCCGTCGACTCAGGCCTCAAGGAGCCAAATTCCTCCACCGTCTTCGCCGGTATTCCAATCGGCGGCAAACAGAAGCAGCAGGGAGGTAGAATCTGATGAATCTCTGTACGCATCTGATCATAATCAAGGTTTGGTTCAAACGAACATGAACATGATGATGGGTGGTAATAGCAGTTACGCTTCTCTTCATAATGTTGGAATTTTGAACTCGGAAACAACACATAACTGGTCCCAAAACTCATTGTGGAGTATTGTAAGCACAACTTCCATGGGAGACAATTCTGGGAGTCCCAGTAATAATAATGATGATCATAGTAATGATAATAATAATAATAACGCTAATAAAGCTGGTGGATCATCTTCTCTTAGTGGAAATCAATGGCCTGACCTACCAGGTGGTTATGGCCCTCCTCCATGA 1008 0.497 MNIQEGGGEGGAGGGGGGGNDQSQPQPQQQPPPPQRCPRCDSVNTKFCYYNNYSLSQPRYFCKTCKRYWTHGGSLRNIPIGGGCRKGKRTKMSSSASSSSAAALQLLSRPSQLQPTQPNLMMTSPASRVLVGRSSAEAAVAAPGVPLISSYYQGGGYLSPPAAIHSQNPLSQPLFNVSSMNLAPSSNLGLHPWFNNAPSTQASRSQIPPPSSPVFQSAANRSSREVESDESLYASDHNQGLVQTNMNMMMGGNSSYASLHNVGILNSETTHNWSQNSLWSIVSTTSMGDNSGSPSNNNDDHSNDNNNNNANKAGGSSSLSGNQWPDLPGGYGPPP 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1323 335 MobiDBLite consensus disorder prediction 285 335 - -
Alju04g1323 335 MobiDBLite consensus disorder prediction 197 235 - -
Alju04g1323 335 MobiDBLite consensus disorder prediction 285 324 - -
Alju04g1323 335 Pfam Dof domain, zinc finger 35 89 IPR003851 GO:0003677|GO:0006355
Alju04g1323 335 ProSiteProfiles Zinc finger Dof-type profile. 35 89 IPR003851 GO:0003677|GO:0006355
Alju04g1323 335 MobiDBLite consensus disorder prediction 1 38 - -
Alju04g1323 335 ProSitePatterns Zinc finger Dof-type signature. 37 73 IPR003851 GO:0003677|GO:0006355
Alju04g1323 335 MobiDBLite consensus disorder prediction 197 222 - -
Alju04g1323 335 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 23 273 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1323 Alju-ChrAlju04 24871944 24872951 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1323 20 97 C2C2-Dof Transcription Factor Family AT5G60200 66.667 1.75e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju04g1323 zf-Dof 6.5e-32 No_clan