Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju04g1322 ATGGCTGCTTCTTCCTCCTCCTCCTCTGCAGCTCAAAGGGTTATGGAAAAACCAAACCAAGAGCTTCTTCAACAGCAACAAGAAGTTCTAAAGTGTCCTCGATGTGACTCATCAAACACAAAGTTCTGTTACTACAACAATTACAGCTTGTCTCAGCCTAGACACTTCTGCAAAGCCTGCAAGCGATACTGGACTCGAGGAGGTACCTTAAGGAATGTTCCTGTTGGTGGAGGTTGCAGAAAAAACAAGCGTACTTTCAAGCGTCCTAATTCATCAGCTTCATCAGAAATTCACAATAATATTATTACTACGCCTTCTTCTAATTCTTCTTCTTCTACTGTCTCAGCTGTTTCAATTTCAAACCCTCCTTCACAATCTCATCAGATCGATATTGCTTCCACCTCCAATCACATCAGTCCTTTATTTTATGGCATGAATCTTCCGTTTCCAAGGTTCAATTCCACTTCTGGGTTTGATTATCATCATAATTCCCTTGGATTGGATTTCATTGATAATATTGCTGGTTACCGAAATGGGTTTTCTTCAAATCACACACTTCTTTCAAGTTATAGTTCTATCTTTGGTAATTCCTCCTCTTCTTCTTCAACATCTGTAACCACATCCAGTACTGTTCCTCCTCCTCATCCTCATATCATGGCTCCACTGTTAAGCTCTACGAATCTGCAGCAACAAAAGTTCATCAATAATGGTGGGGCTGCTAATAACAGTACTTTTCAGGGGTTTGCAATAGCAGGCAATAATAATAGCAATAACAGTACGAGTACTGAGGCTGAGATGGTTGCTTTAAAAGAAGTGAAATCTGTGGTGGTGGGGGAAGATGATGATAATAACAGGTTTCTGGGTTGGCAAAATAACCAGATCGAGCATCATCAAGAAGGAGGCTTGATTATGTCTGATCCTACTTCATCACTTTACTGGAACACTACTGCTGCAACAGCTATGGGTACTACTAATACTTGGAATGATCAAACCAATATTGGTCCTCCTCAGTCACTTCTCTCATCATCTGATCTACAATAA 1041 0.4044 MAASSSSSSAAQRVMEKPNQELLQQQQEVLKCPRCDSSNTKFCYYNNYSLSQPRHFCKACKRYWTRGGTLRNVPVGGGCRKNKRTFKRPNSSASSEIHNNIITTPSSNSSSSTVSAVSISNPPSQSHQIDIASTSNHISPLFYGMNLPFPRFNSTSGFDYHHNSLGLDFIDNIAGYRNGFSSNHTLLSSYSSIFGNSSSSSSTSVTTSSTVPPPHPHIMAPLLSSTNLQQQKFINNGGAANNSTFQGFAIAGNNNSNNSTSTEAEMVALKEVKSVVVGEDDDNNRFLGWQNNQIEHHQEGGLIMSDPTSSLYWNTTAATAMGTTNTWNDQTNIGPPQSLLSSSDLQ 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju04g1322 346 MobiDBLite consensus disorder prediction 324 346 - -
Alju04g1322 346 ProSiteProfiles Zinc finger Dof-type profile. 30 84 IPR003851 GO:0003677|GO:0006355
Alju04g1322 346 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 17 226 IPR045174 GO:0003700|GO:0006355
Alju04g1322 346 Pfam Dof domain, zinc finger 28 84 IPR003851 GO:0003677|GO:0006355
Alju04g1322 346 ProSitePatterns Zinc finger Dof-type signature. 32 68 IPR003851 GO:0003677|GO:0006355
Alju04g1322 346 MobiDBLite consensus disorder prediction 82 129 - -
Alju04g1322 346 MobiDBLite consensus disorder prediction 88 129 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju04g1322 Alju-ChrAlju04 24811199 24812239 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju04g1322 30 145 C2C2-Dof Transcription Factor Family AT1G28310 59.483 1.21e-36 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju04g1322 zf-Dof 1.5e-33 No_clan