Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g2411 ATGATGTATACCTCCTCAATTCATATTGCTTGCGTTAGTTATGAAGTAGGTCAAGATCTCGCCACGTATGCCAAACACCGACACCGTGTATTCAGAGCTGTGACACGCACCTGGCCAACTTACCCTCATGCATCATCATGTGCTTATGGCTTGGAAGCACTACACATTCCCAAGATTGGCTCTCATATCATTCGATGCAGGCTGAAAGCAGAGGAAGTAATCATGGAGAGTAGTGAGTGGAAGCCTAAAGTTGAGATATCACCCAATTGTCCCAGGTGTGGGTCTTGTAACACCAAGTTCTGCTACTACAATAACTATAGTTTAACTCAACCTCGCTACTTCTGCAAGGGATGCAGAAGGTACTGGACCAAGGGAGGATCACTCCGAAATGTCCCCGTCGGTGGCGGCTGCCGGAAGAACAGACGTGGCAGTAAGACTTCCTTCAGACAATCATCCATGGATGCTCTTCCTCCCAAGATTTCACCTCACGGAGATAATTGTAATAATCCCGCAACAAATCCACCTTCAGGTGTGTCAGATGCTCCAAATATTGATCTTGCACTTGTTTATGCGAATTTCCTCAATCAAAAGCCAGATCCAAGAGCACCAAGCGCAGACGTCGTTGTTGGTTTGCCATCTGAAGATCATGATCAAGTTGGTGTAAGTGGGTTTTTGGCAGAATCACAATTGAGTGAGAGTGATCAAATGTACCTGTATGGATTCAACTCTATGCCGAATAATCAGGAAGATCATGGGATTGATCAGCGTTGTAGTAGTAGTAGTGGGAGTCATGAAGCTATGAATTTTGAGTTGCCGCCATTGCCAGGTGAAGAGGCGACCTTGCATGATGATATGATGTGGTCCAATAATTCAGGCTTGCACTCCTCGCAGTTCCCTCTTTTTGGTGCTGATGATGCAGACTTCTTATTGGATAGTTGGAGCAACTTCCATTGA 954 0.4549 MMYTSSIHIACVSYEVGQDLATYAKHRHRVFRAVTRTWPTYPHASSCAYGLEALHIPKIGSHIIRCRLKAEEVIMESSEWKPKVEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKNRRGSKTSFRQSSMDALPPKISPHGDNCNNPATNPPSGVSDAPNIDLALVYANFLNQKPDPRAPSADVVVGLPSEDHDQVGVSGFLAESQLSESDQMYLYGFNSMPNNQEDHGIDQRCSSSSGSHEAMNFELPPLPGEEATLHDDMMWSNNSGLHSSQFPLFGADDADFLLDSWSNFH 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g2411 317 ProSitePatterns Zinc finger Dof-type signature. 90 126 IPR003851 GO:0003677|GO:0006355
Alju03g2411 317 ProSiteProfiles Zinc finger Dof-type profile. 88 142 IPR003851 GO:0003677|GO:0006355
Alju03g2411 317 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 80 258 IPR045174 GO:0003700|GO:0006355
Alju03g2411 317 MobiDBLite consensus disorder prediction 133 179 - -
Alju03g2411 317 MobiDBLite consensus disorder prediction 165 179 - -
Alju03g2411 317 Pfam Dof domain, zinc finger 89 142 IPR003851 GO:0003677|GO:0006355
Alju03g2411 317 ProSiteProfiles 4Fe-4S ferredoxin-type iron-sulfur binding domain profile. 80 111 IPR017896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g2411 Alju-ChrAlju03 50734970 50737438 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g2411 67 289 C2C2-Dof Transcription Factor Family AT3G52440 42.562 2.67e-46 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju03g2411 zf-Dof 3.5e-30 No_clan