Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1692 ATGTCGGAAGCAAAAGACCCGGCGATCAAGCTCTTTGGAAAGACGATCCCGCTGCCGGAGATACCGATCGGATCTGGAGGCTCTTCCGGAGCTCCGACTTCTTCTTCTGGGGATATTGGTGATGATGGTATTGATCACAATTGTGCTTCTCCCACCAACTCATCGCGAGAGTCCAACACAAAGAGGGATGAGGAAGAACAAGAAACTGAGAAGGACACTTTGGGAGAGAATCCAAATGAGAATACGGAGGATGGAGCCCCCACTCTATCTACAGAAGAGGTCACTAATCCGGATGCAGCCTCAAGAACAGGTGAAGAATCTGATACGCCCCGTGCTGAGAAGGATGCTACTACATTGAAGGCTTCAAAATTTGAAGAAGAGCAGAGTGAGACGAGTAATTCGCAAGAGAAGACTTTGAAAAAGCCAGACAAAATACTGCCCTGCCCCCGCTGCAATAGCATGGACACCAAGTTCTGCTACTACAATAATTACAATGTCAACCAACCCCGCCACTTCTGCAAGAACTGCCAGAGATACTGGACTGCTGGTGGAACCATGAGGAACGTGCCTGTGGGCGCTGGTCGTCGAAAGAACAAGAATTCTTCTCAGTATCGCCAAATAACTGTCGCTGAAGCTCTCCAGACTGCTCGAACAGACATGCCAAATGGAGTACATCATCCTGCCTTGAAGCCCAATGGCACAGTCCTTGCTTTTGGGTCTGATGCACCTTTGTGTGAGTCAATGGCATCTGTATTGAACCTTGCTGATAAAACAATGCAGGACTGCACGAGAAACGGGTTTCATAGACCCAAAGAACTAAGAATTCCTGTTCCCTATGCCAGTGGAGAGAAAGGGGATGATCATTCTAATAAATCTCCTGTGATGTCAACAAAGCCAATGGATGATGCAAGCATCAACAGGCAACAAGAACAAGCAATGCTCAACTGCCAGAGTTTTCCACCTCAAGTTCCTTACTATCCCGGGGCACCTTGGCCTTTCCCATGGAATCCGGTGCAGTGGAGCTCTCCTGTACCACCACCACCCGCATTTTGCCCTCCAGGATTCACCATGCCATTCTATCCTGCAGCTGCATATTGGGGTTGTACTGTCTCAGGTGCTTGGAACATACCATGGCTACCTCAACCGTCATCACCAAACAGCATGAGCCCTAATTCTGGCCCTAACTCGCCCACCCTGGGTAAACATTCAAGAGAAGAAAACATGCTCAAGATAAATGACTCTGGTGGAGAGGATGAACGTAGTGGTAAAGAAAATGGCAAAGAGAAGTGTCTTTGGGTTCCTAAAACTTTGAGGATTGATGACCCGGACGAAGCAGCTAAAAGCTCTATATGGACAACGCTGGGGATTAAAAATGATAAGGCTGAGTCTGTTCGAGAGGGAAGACTCTTCAGGGCTTTCCCCTCAAAGGGTGATGGAAAAGATCACTCAGCACAAAGCTCAACAGTCTTGCACGCCAATCCAGCGGCGTTGTCTAGGTCACTCAACTTTCATGAGACCTCATAA 1524 0.4816 MSEAKDPAIKLFGKTIPLPEIPIGSGGSSGAPTSSSGDIGDDGIDHNCASPTNSSRESNTKRDEEEQETEKDTLGENPNENTEDGAPTLSTEEVTNPDAASRTGEESDTPRAEKDATTLKASKFEEEQSETSNSQEKTLKKPDKILPCPRCNSMDTKFCYYNNYNVNQPRHFCKNCQRYWTAGGTMRNVPVGAGRRKNKNSSQYRQITVAEALQTARTDMPNGVHHPALKPNGTVLAFGSDAPLCESMASVLNLADKTMQDCTRNGFHRPKELRIPVPYASGEKGDDHSNKSPVMSTKPMDDASINRQQEQAMLNCQSFPPQVPYYPGAPWPFPWNPVQWSSPVPPPPAFCPPGFTMPFYPAAAYWGCTVSGAWNIPWLPQPSSPNSMSPNSGPNSPTLGKHSREENMLKINDSGGEDERSGKENGKEKCLWVPKTLRIDDPDEAAKSSIWTTLGIKNDKAESVREGRLFRAFPSKGDGKDHSAQSSTVLHANPAALSRSLNFHETS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1692 507 MobiDBLite consensus disorder prediction 104 144 - -
Alju03g1692 507 MobiDBLite consensus disorder prediction 57 78 - -
Alju03g1692 507 Pfam Dof domain, zinc finger 143 200 IPR003851 GO:0003677|GO:0006355
Alju03g1692 507 MobiDBLite consensus disorder prediction 480 507 - -
Alju03g1692 507 MobiDBLite consensus disorder prediction 277 298 - -
Alju03g1692 507 MobiDBLite consensus disorder prediction 79 103 - -
Alju03g1692 507 ProSiteProfiles Zinc finger Dof-type profile. 146 200 IPR003851 GO:0003677|GO:0006355
Alju03g1692 507 ProSitePatterns Zinc finger Dof-type signature. 148 184 IPR003851 GO:0003677|GO:0006355
Alju03g1692 507 MobiDBLite consensus disorder prediction 384 402 - -
Alju03g1692 507 MobiDBLite consensus disorder prediction 1 144 - -
Alju03g1692 507 MobiDBLite consensus disorder prediction 384 404 - -
Alju03g1692 507 PANTHER CYCLIC DOF FACTOR 2 1 507 IPR045174 GO:0003700|GO:0006355
Alju03g1692 507 MobiDBLite consensus disorder prediction 472 507 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1692 Alju-ChrAlju03 45146433 45149348 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1692 6 507 C2C2-Dof Transcription Factor Family AT5G39660 45.524 2.80e-117 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju03g1692 zf-Dof 3.2e-32 No_clan