Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1391 ATGGCCGATGTGAAGAACGGCCAAGATAATCATGAGGGGATAAAGCTGTTTGGGGCTACGATCACGTTGCACCGGGCAAGAAAACTGGATCAGAATAAGGTGGAGGAGGAGGAGGAGGATCGGAGGTCGACGACGCCGGAGAAGAGGCCCGACAAGATCATACCATGTCCAAGATGTAATAGCATGGACACCAAGTTTTGTTACTTCAACAATTATAATGTTAATCAGCCCAGGCACTTCTGTAAAGGGTGTCAGAGGTACTGGACGGCCGGCGGCGCCCTCCGGAATGTGCCCATCGGAGCCGGTAGGAGGAAGGCCAAGCCACCTTGCCGTGGGGCGGCAGGATTCTCGGAGGGATGTGGCTACGACGAATCTGTCGTCGACGACGGAGGCTACCGACGGTTTGCTTTGGATGAGGGGCTGGGTATTATGGAGGAGTGGCGTGTTGCAGTGGCTCAGAGTGGTTTCCGGCACCTTTTGCCTGCGAAACGGCCAAGGAACACTATTGCCGGTCAACCTTTTTAA 525 0.5467 MADVKNGQDNHEGIKLFGATITLHRARKLDQNKVEEEEEDRRSTTPEKRPDKIIPCPRCNSMDTKFCYFNNYNVNQPRHFCKGCQRYWTAGGALRNVPIGAGRRKAKPPCRGAAGFSEGCGYDESVVDDGGYRRFALDEGLGIMEEWRVAVAQSGFRHLLPAKRPRNTIAGQPF 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1391 174 PANTHER CYCLIC DOF FACTOR 2 33 107 IPR045174 GO:0003700|GO:0006355
Alju03g1391 174 ProSitePatterns Zinc finger Dof-type signature. 56 92 IPR003851 GO:0003677|GO:0006355
Alju03g1391 174 ProSiteProfiles Zinc finger Dof-type profile. 54 108 IPR003851 GO:0003677|GO:0006355
Alju03g1391 174 MobiDBLite consensus disorder prediction 30 52 - -
Alju03g1391 174 Pfam Dof domain, zinc finger 52 107 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1391 Alju-ChrAlju03 42368131 42368655 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1391 10 172 C2C2-Dof Transcription Factor Family AT1G29160 54.237 1.21e-54 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju03g1391 zf-Dof 2.4e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1391 03 42368131 42368655 Alju03g1391 03 42368131 42368655 ECH