Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju03g1284 ATGATCAACGGTAAGCCTCAGGCTCAGCCACAGCAACCCCAGAAATGTCCTCGGTGTGATTCTCTCAACACCAAGTTCTGTTACTACAACAACTACAGCCTGTCCCAGCCTCGTTACTTTTGCAAGGCCTGTCGACGGTACTGGACCCAAGGCGGAACCTTGAGGAACGTCCGCGTCGGCGGTGGCTGCCGCAAGCCCAAGCGAACCAAAGGAAGTTCTTCCTCTTCCGCCCCGTCTCGAGAGGCGGAGGTTCAGAACGACCCTTCCGCCTCGAATTCTGCTTCTGCTGCTGCTACTTTGGCGGTCCCATCCATCAGCCCCTTTTATCAAGGCGGTGCATGTGCTGGTGGTGGTGGTGGGTATTTGTCGTCCCTGGCGGCGATTCATTCCCTGAATCCATCACAGCCGTTCAATCAGATGAGTCTTCTTTCTGGGTTCGGTGGTGCTGATATTCCTTTGGGCTCATCATCAATACGGCCGCCGTTTTATCAGATGAGTAGTATCAGAGACAAGGAAGAAGAGACGACTGATCTGTATGAAGCAGACCAAGTTCTGATTCAGTCAACCACGGCGAATAGTGGTTCTGCTTCAACTCATCACCATGATGATTGGACCGAAAGCTTCATCAACAACGTTAATAACCAGAGAGGATCCGATGCCTCTCTGTGGAGCACCACCATGAGTACCGTTTCCACTAGTGGAAATTCTCAGAGTCATAATAATGATACTGTTGGTGGGTCATTTTCTTTGATCCCCAATCACCAGTGGCTTCATCTTCCTGACTATGACCCTCCTCCATGA 801 0.5119 MINGKPQAQPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVRVGGGCRKPKRTKGSSSSSAPSREAEVQNDPSASNSASAAATLAVPSISPFYQGGACAGGGGGYLSSLAAIHSLNPSQPFNQMSLLSGFGGADIPLGSSSIRPPFYQMSSIRDKEEETTDLYEADQVLIQSTTANSGSASTHHHDDWTESFINNVNNQRGSDASLWSTTMSTVSTSGNSQSHNNDTVGGSFSLIPNHQWLHLPDYDPPP 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju03g1284 266 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Alju03g1284 266 MobiDBLite consensus disorder prediction 60 91 - -
Alju03g1284 266 MobiDBLite consensus disorder prediction 68 91 - -
Alju03g1284 266 Pfam Dof domain, zinc finger 12 68 IPR003851 GO:0003677|GO:0006355
Alju03g1284 266 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Alju03g1284 266 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 8 214 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju03g1284 Alju-ChrAlju03 41410402 41411202 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju03g1284 2 158 C2C2-Dof Transcription Factor Family AT4G21050 43.275 5.34e-34 120
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju03g1284 zf-Dof 2.1e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju03g1284 03 41410402 41411202 Alju03g1284 03 41410402 41411202 ECH
Alju03g1284 03 41410402 41411202 Alju03g1284 03 41410402 41411202 PCT