Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g3246 ATGAGAAGCCATATCCAATTTCTGTTAGGCCTCGCGCTCTTCAGCATTCTCTGTCTCGTTCAAACCAAATCCATCATCGAACCTTGCTCCTCCTCAGATTCCTGCTTCTCGCTTCTCTCCTTCGTCGTCCCCTGGGACTCCAAGCTCTCTGAAATCGCCTCGCGCTTCCAGGTAAATGTCTCCGACATCCTCGCTGCCAACTCCGTCTGGCCGATATCGCAGAAACTCTCCGATCAGATCATCAGATCCAAATCCATCGTGAAGATCCCAATGTCGTGCCCCTGCGTCGACGGAATTCGAAGATCCATGTCCACAATCTACACCGTGCTAGCATCGGACACACTGGAGACAATATCGGAGGGATTCGGCGGGCTGGTGAGCGCCAACCAGATAGCGACGGTGAACAGCATCAATGCGACGAATCGGTTAACGAACGGCGGGAGATTGGTGATACCGTTGCCGTGTTCGTGCTTGAATAATGTAAGGAACGGTGAAACGACAGTGTATATGTCGTATGTGGTGAGAGAGGGGGAGAGCTTGAGGAGTATCGCGTCGGGTTCAAAAACGACAGTGTCGGATTTGGAAGCTGTCAATGGATTGAGTCACGACTCGGTCGAACCAGGAGATATCATTGCCCTTCCCATGGCAGCATGTTCTTCAACGGCACTGAATTGGTACAACGAGAGTCTCATTGTCCACAATGGCTCATATGCTCTTACTGCCTCCAACTGCATCAAATGCTCTTGTAGCCCCATTGATCTCAGGCTGCAATGTTATCCATCTGCTCTACCAGTTCCCTGCTTCAACTTACAGTGCAAAGATTCCAATATTGTAATTGGAGACCAATCTGTCACTTATTTCAATCCTGGCTGTAATGTCACTCAGTGTGTATACCGTGGCCACAGAGGTGGTAAGATCCTAAGAAGTGTGTCAAAATCTTCTTATCTCAAGTGCCCGGAAAATGAGACTCATAATGCAGCACCTACTCCTTGGCCATCAATAAATTTCAATCCCGTGGTTATGCCATTTAGGGAACTTTCTCCATACCCGTCACCTAGTCCTGTTTCTGACGCTTTGATGATGATGATGCACACCACTCAAGTTTCAATCAACTTGCTCCTACTATTCATTTGGATTTGTTTCCTATGA 1149 0.4822 MRSHIQFLLGLALFSILCLVQTKSIIEPCSSSDSCFSLLSFVVPWDSKLSEIASRFQVNVSDILAANSVWPISQKLSDQIIRSKSIVKIPMSCPCVDGIRRSMSTIYTVLASDTLETISEGFGGLVSANQIATVNSINATNRLTNGGRLVIPLPCSCLNNVRNGETTVYMSYVVREGESLRSIASGSKTTVSDLEAVNGLSHDSVEPGDIIALPMAACSSTALNWYNESLIVHNGSYALTASNCIKCSCSPIDLRLQCYPSALPVPCFNLQCKDSNIVIGDQSVTYFNPGCNVTQCVYRGHRGGKILRSVSKSSYLKCPENETHNAAPTPWPSINFNPVVMPFRELSPYPSPSPVSDALMMMMHTTQVSINLLLLFIWICFL 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g3246 382 Gene3D LysM domain 160 223 IPR036779 -
Alju02g3246 382 ProSiteProfiles LysM domain profile. 170 213 IPR018392 -
Alju02g3246 382 CDD LysM 105 151 IPR018392 -
Alju02g3246 382 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 7 321 - -
Alju02g3246 382 Gene3D LysM domain 101 159 IPR036779 -
Alju02g3246 382 SMART LysM_2 49 90 IPR018392 -
Alju02g3246 382 SMART LysM_2 106 152 IPR018392 -
Alju02g3246 382 SMART LysM_2 171 214 IPR018392 -
Alju02g3246 382 SUPERFAMILY LysM domain 170 214 IPR036779 -
Alju02g3246 382 Pfam LysM domain 172 214 IPR018392 -
Alju02g3246 382 Pfam LysM domain 49 90 IPR018392 -
Alju02g3246 382 Pfam LysM domain 107 152 IPR018392 -
Alju02g3246 382 CDD LysM 171 213 IPR018392 -
Alju02g3246 382 ProSiteProfiles LysM domain profile. 105 151 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g3246 Alju-ChrAlju02 49964801 49973818 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g3246 8 358 LysM Receptor-like Protein (LYPs) Gene Family AT1G21880 42.373 2.50e-80 250