Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g2626 ATGGTCTTCTCTTCCCTTCCACTCTATCATCTAGATCCACCAGCCAACTGGCCTCACCAGCAACTTGATCAGCAGCCAGAAGGACTTATTCATGCCCAGAGTTCCCAGGTTCCTCGTCCTCCTCCGCCGCCGCGGTCACTACCGGTTGCCGATGCCAGTGATGGCGACAAAGGCTCGACGAGGCCGGGATCCATGGCTGATCGAGCTCGGCTAGCGAAGATAGCACAGCCAGAAGCGGCACTGAAATGTCCACGGTGCGAATCAACCAACACCAAGTTCTGTTACTATAACAATTACAACCTCTCTCAGCCTCGCCACTTCTGCAAGACTTGCCGGCGATACTGGACACAAGGCGGTGCGTTGAGGAACGTCCCGGTCGGAGGAGGTTGCAGAAGGAAAAACAAAAGAACCAAAGGAACTAACAGCAGCAAATCATCAAAATCTCCCAACAAAGCAGCATCAACATCAGGTTCTTCCATTATCCTAAACTCTGCAAGTGCCAATGATTCCTCAAGTAACTGTTGCCCTAGTAATGATCATCTTCATCATCACTTGATAGGTCATCACTTTTTACCATCTCCACAATTACTCTTCCCTCCTCCTCCTACTACATCTCATAGTAGTTACAGTGACTACGACGTCGTTTTTGGGGCAACAAACATCAAAGATGCTGAATTTCAAATTGCTTGTAATAATAATATAATTGGCAATAATAACATCAATGGCTTTATTAGTTCTACTGAGCAATGGAAGCTACCAAGTCTCCTGCAGCATCATCAACAGTTTCCTTCAACATTCTTGAGTAATTTGGAGGCTCCACCAGTTGGGTTATATCATCAGTTTGAACGATCAGAAAATAATGCTGAGATCATCGAACCTAATTCGACGACATTGTTATATTCTGGTGGTAGTGGAAATATTGGTAGTGATCATCATCATCTTCAGCTTACTACTACAGTTAAAATGGAGGAAAATATGGATCAAGTGGTGGGTTTATCCAAGAGTCTTACGGGTAACTCAGAAAATAATAATAGTGAACGATTCTGGGAAGCAAATAATAATGGCAATGCATGGAATATCAATAATGTTTCTATTGGTTTCGCTTCTTCTTCTTCTTCGGCCGCCACCCATCTCGTGTGA 1140 0.4439 MVFSSLPLYHLDPPANWPHQQLDQQPEGLIHAQSSQVPRPPPPPRSLPVADASDGDKGSTRPGSMADRARLAKIAQPEAALKCPRCESTNTKFCYYNNYNLSQPRHFCKTCRRYWTQGGALRNVPVGGGCRRKNKRTKGTNSSKSSKSPNKAASTSGSSIILNSASANDSSSNCCPSNDHLHHHLIGHHFLPSPQLLFPPPPTTSHSSYSDYDVVFGATNIKDAEFQIACNNNIIGNNNINGFISSTEQWKLPSLLQHHQQFPSTFLSNLEAPPVGLYHQFERSENNAEIIEPNSTTLLYSGGSGNIGSDHHHLQLTTTVKMEENMDQVVGLSKSLTGNSENNNSERFWEANNNGNAWNINNVSIGFASSSSSAATHLV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g2626 379 ProSitePatterns Zinc finger Dof-type signature. 83 119 IPR003851 GO:0003677|GO:0006355
Alju02g2626 379 Pfam Dof domain, zinc finger 80 135 IPR003851 GO:0003677|GO:0006355
Alju02g2626 379 MobiDBLite consensus disorder prediction 18 32 - -
Alju02g2626 379 MobiDBLite consensus disorder prediction 14 65 - -
Alju02g2626 379 MobiDBLite consensus disorder prediction 125 156 - -
Alju02g2626 379 ProSiteProfiles Zinc finger Dof-type profile. 81 135 IPR003851 GO:0003677|GO:0006355
Alju02g2626 379 MobiDBLite consensus disorder prediction 141 156 - -
Alju02g2626 379 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 68 278 IPR045174 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju02g2626 Alju-ChrAlju02 31091935 31093299 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g2626 1 138 C2C2-Dof Transcription Factor Family AT2G37590 57.823 1.45e-43 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju02g2626 zf-Dof 2.1e-32 No_clan