Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju02g1839 ATGGACCTTGCTCGGTTATTCCTGGTAATCATATTCGGTGTTGCCGCCGCATCATGGGTGGCGGTGGTGGAGGCTCAGCCAGCGCCGACGTTCAAATGCAGCTCGGAAGGTAAAACGTGTCATTCCCTGGTGGACTATTCGTCCCCAAATGAAACCACCTTAGGTCACATTCAAAAGCTCTTCAACTTGAAGCACGTTCTGGACATAGTCGGCGCTAACGCCTTCCCCTCCACCACCAGAGGCAACCGCACCGTTAAAAGTCGCGAAATAATCAAAATCCCCTTTCAGTGCAAGTGTTCCAACGGCACCGGCTTGTCCAACAAGACGCCTCTCTACACCATCCAGAAAGGTGACACGCTTTACCACATAGCCGTGGAGGTTTTCTCGAGTTTGGTCACTTATCAACAACTCCAAACGCTCAACAACATATCAAACCCTCTAACGATTCAGCCCGGCCAGAAGGTGTGGATCCCTCTCCCTTGCAGCTGCGATCAGGTCGACAGCGCCGACGCAGTCCACTATGGTCATCGGGTGGCTAACGGCAGCTCATTTCAGCAGATTGCTCTACAATACGGCACCACCCAAGATACCCTTCTCGCCCTCAACAACATTTCTTATCCTAAGTCCCTTAAAGCCGGTCAAATCATCGATGTTCCCCTCAAAGCTTGTTCCTCACCGCCGGTGAGGAATGACTCCTTGGACTATCCTCTGCTCGTTGCAAATGGTACCGACACATACACTGCCAATGGTTGCGTCAAGTGCAGCTGTGACTCCGCCGCCGTTAACGCCACATTACTATGCAAGCCATCGCAAGTTAAACCATATAAATGGGATACATGCCCGTCTATGCTATGCGGAAATTCAACCATTGGTAACATCACTTCTACAGCTTCCTGCACTCGTACTATCTGTGCTTACACTGGTTATAGCAACCAAACTATTTTCACCGATCTTGTCAGCGAGTCCACTTGTCCTGCACCAACAGGATCACCAGCAGGATCAGGAGCATCCAGTATCAACTCCTTGCAAGGCTGGGGTTGGAATCTTCTTTTCATGGCACTTCACTTTATCTTCTTCCGTGTCTATCTTTTGTAG 1095 0.5014 MDLARLFLVIIFGVAAASWVAVVEAQPAPTFKCSSEGKTCHSLVDYSSPNETTLGHIQKLFNLKHVLDIVGANAFPSTTRGNRTVKSREIIKIPFQCKCSNGTGLSNKTPLYTIQKGDTLYHIAVEVFSSLVTYQQLQTLNNISNPLTIQPGQKVWIPLPCSCDQVDSADAVHYGHRVANGSSFQQIALQYGTTQDTLLALNNISYPKSLKAGQIIDVPLKACSSPPVRNDSLDYPLLVANGTDTYTANGCVKCSCDSAAVNATLLCKPSQVKPYKWDTCPSMLCGNSTIGNITSTASCTRTICAYTGYSNQTIFTDLVSESTCPAPTGSPAGSGASSINSLQGWGWNLLFMALHFIFFRVYLL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju02g1839 364 SMART LysM_2 175 219 IPR018392 -
Alju02g1839 364 SMART LysM_2 111 158 IPR018392 -
Alju02g1839 364 CDD LysM 176 218 IPR018392 -
Alju02g1839 364 ProSiteProfiles LysM domain profile. 174 218 IPR018392 -
Alju02g1839 364 Pfam LysM domain 176 219 IPR018392 -
Alju02g1839 364 Pfam LysM domain 112 158 IPR018392 -
Alju02g1839 364 CDD LysM 112 157 IPR018392 -
Alju02g1839 364 Gene3D LysM domain 166 226 IPR036779 -
Alju02g1839 364 PANTHER LYSM DOMAIN-CONTAINING GPI-ANCHORED PROTEIN 2 6 327 - -
Alju02g1839 364 Gene3D LysM domain 106 165 IPR036779 -
Alju02g1839 364 SUPERFAMILY LysM domain 111 159 IPR036779 -
Alju02g1839 364 SUPERFAMILY LysM domain 175 219 IPR036779 -
Alju02g1839 364 ProSiteProfiles LysM domain profile. 110 157 IPR018392 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju02g1839 14 329 LysM Receptor-like Protein (LYPs) Gene Family AT2G17120 46.541 2.29e-88 268