Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g1277 ATGATTAGCCTACGGAACCTGGTAAAAGAGATTATGGAGAGAGGGTGGAAGCATAATTCGGAGATATCACCTAATTGTCCGAGGTGTGGCTCTTGCAACACCAAGTTCTGCTATTACAATAACTACAGCTTAACTCAACCTCGCTACTTTTGCAAAGCCTGCAGAAGGTACTGGACCAAAGGAGGATCCCTCCGCAACGTCCCCGTTGGCGGTGGCTGCCGGAAAACCAGGCGCCATACTAGCAAGACTTTAAGACTACACTCATCAGCCTTGCCTTCTCCACCTAATGCTTCTCATCATCATCATGCCCATCCCTCAACTGTTTCTTCAGAGGCATCTGATCATGATCACCATGCTCCACATATTGATCTTGCACTCATTTACTCGAATTTTCTCAATCAAAGCCCAGATTCAAGTGATCAGGAGCCACATCATCAATTCATGAAAACACTAGGTTTTGATCCTTGCGTAGAGTATCCGAGTCTATCCGACATAGTTTTTGGTCTTTCTGAACCATCAACAATAGAATCCCATTTCAATGTTGCTGAGGATCATCGTCATGATTTGGGTGGGTTATTTAACTCCATGCAGGAGCATAAGGAAGACAGAATAATTGGTACTGGCGATTTTGAGCTGCCACCATTACCAGGAGAAGAGTTAGCCCTGCAATATGATATGACGACTACGTGGTCCGAATCTCATGATGAGATGATGGTCGTAAACCAGGCGCCACTTGGAACTCAACCTCATGTGAATGGTAATTGGGGACATTTTCATTACTCAACCAATGTTTCTTTTCCAAGCCTTTGA 810 0.4457 MISLRNLVKEIMERGWKHNSEISPNCPRCGSCNTKFCYYNNYSLTQPRYFCKACRRYWTKGGSLRNVPVGGGCRKTRRHTSKTLRLHSSALPSPPNASHHHHAHPSTVSSEASDHDHHAPHIDLALIYSNFLNQSPDSSDQEPHHQFMKTLGFDPCVEYPSLSDIVFGLSEPSTIESHFNVAEDHRHDLGGLFNSMQEHKEDRIIGTGDFELPPLPGEELALQYDMTTTWSESHDEMMVVNQAPLGTQPHVNGNWGHFHYSTNVSFPSL 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g1277 269 ProSitePatterns Zinc finger Dof-type signature. 26 62 IPR003851 GO:0003677|GO:0006355
Alju01g1277 269 MobiDBLite consensus disorder prediction 87 103 - -
Alju01g1277 269 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 168 IPR045174 GO:0003700|GO:0006355
Alju01g1277 269 Pfam Dof domain, zinc finger 25 78 IPR003851 GO:0003677|GO:0006355
Alju01g1277 269 ProSiteProfiles Zinc finger Dof-type profile. 24 78 IPR003851 GO:0003677|GO:0006355
Alju01g1277 269 MobiDBLite consensus disorder prediction 87 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g1277 Alju-ChrAlju01 10014235 10015249 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g1277 19 233 C2C2-Dof Transcription Factor Family AT3G52440 44.186 4.22e-46 154
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju01g1277 zf-Dof 1.6e-30 No_clan