Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Alju01g0917 ATGTCGGCCAACGATCCCGGTTTCATACTCTTCGGCCAAAAGATGTCGGCATCTCAGATTCCGGCCACCTCTTCCCCGATTCCATCCAACTCTCCTCCCGAGCATGATTGGAGTAGCTCAAAGAAATCAGAAGCCGGAATGCCTTCTACAGAAACCTCAGAACAACAACAAAATGAGCATCAGAAGAATGAGGTAACGAAGATAAGCAGTGCAGAAGAATTTAAAATGATGAAGAAACCAGACAAGATTCAGCAGTGTCCACGATGCAACAGTATGGACACAAAGTTCTGTTACTTCAACAACTACAACGTGAATCAGCCTCGACATTTCTGCAAGAGCTGCCACAGATATTGGACTGCCGGTGGAGCAATGAGAAATGTGCCAGTCGGCGCCGGAAGACGAAGGAACAGGCAACTATCCTCGCCATACCATCGCCAAACTGCAGCATCCTCCGAAGGCCTTCCAGTTCCAACCCCAAACACAGACTCATCTTCTCAACAACGTTTCACAGCTCTTGAATCCTCATCGACTTTCAAGTCATCAGCACCGCCAGATAATACTAGTAGTGTGTTGAGATTTGGTCCAGAGGACCCTGTTTCTGAATCTGCGAGTTCAATTCTGACCAAAGCTAGTGGTGGTGCCCGTGGAAATGAAGTATCAGAACTAATGCAATGGAACAGAGGTGTGTCCAATCTGATGAACACATCAAATGGTGTGCGGTGTTATCCTGCTGCTCCATGGGTGTTTCCAGTCCAGTGGTATGCTGATAATAAGATTGGCTCACCAAACATTCCTGTACAATTTGTGGCATGTTGGAGTAATGGGACTGGTGTTTCAATTGCCTCTAATGGTTGCCTCTCTTCCTCATCCTCTACCAGTAATGGCCCAGCCCTTGGAAAACACCGATGA 909 0.4719 MSANDPGFILFGQKMSASQIPATSSPIPSNSPPEHDWSSSKKSEAGMPSTETSEQQQNEHQKNEVTKISSAEEFKMMKKPDKIQQCPRCNSMDTKFCYFNNYNVNQPRHFCKSCHRYWTAGGAMRNVPVGAGRRRNRQLSSPYHRQTAASSEGLPVPTPNTDSSSQQRFTALESSSTFKSSAPPDNTSSVLRFGPEDPVSESASSILTKASGGARGNEVSELMQWNRGVSNLMNTSNGVRCYPAAPWVFPVQWYADNKIGSPNIPVQFVACWSNGTGVSIASNGCLSSSSSTSNGPALGKHR 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Alju01g0917 302 PANTHER CYCLIC DOF FACTOR 2 4 301 IPR045174 GO:0003700|GO:0006355
Alju01g0917 302 Pfam Dof domain, zinc finger 81 138 IPR003851 GO:0003677|GO:0006355
Alju01g0917 302 MobiDBLite consensus disorder prediction 16 56 - -
Alju01g0917 302 MobiDBLite consensus disorder prediction 1 80 - -
Alju01g0917 302 MobiDBLite consensus disorder prediction 135 197 - -
Alju01g0917 302 MobiDBLite consensus disorder prediction 57 80 - -
Alju01g0917 302 ProSitePatterns Zinc finger Dof-type signature. 86 122 IPR003851 GO:0003677|GO:0006355
Alju01g0917 302 MobiDBLite consensus disorder prediction 141 188 - -
Alju01g0917 302 ProSiteProfiles Zinc finger Dof-type profile. 84 138 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Alju01g0917 Alju-ChrAlju01 6815919 6817715 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Alju01g0917 49 190 C2C2-Dof Transcription Factor Family AT1G26790 48.966 3.31e-38 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Alju01g0917 zf-Dof 2.6e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Alju01g0917 01 6815919 6817715 Alju01g0917 01 6815919 6817715 ECH