Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03584 ATGGCTACACTCATTGCTCCTACAAACCACTCCCCTCTTGAAGATGCAGAAGCTATCCGAAAGGCCGTCAAAGGATGGGGAACTGATGAAAAAGTGATTATAACAATACTTGGTCACAGAGATGCAATTCAAAGGCAAAAAATCAGAGAAGCATATTATGAACTCTTTCAAGAAGATCTCATCAAACGCCTTGAATCAGAGCTCTCCGGTGACTTTGAGAGAGCCATGTACCGGTGGATAGTTGAGCCTTCAGAACGTTATGCATTGTTGGCCAATATAGCCCTCAGGCATGCTGACAGAAACTATGACGTCATCGTCGAAATCGCATGCGCCCTCTCGCCGGAAGAGCTCTTTATCGTAAGGCGCACCTACCATAACCGTTATCATCATTCCTTGGAAGAAGATGTGGCCGCTAATACTAGCGGCCATCTTCGCCAGGCAAGTTTTTTTCTTTTTCTATATAATTTCCAGCTATTGGTTGGGTTGGTGAGCTCATTTAGGTATGGTGGGAATGAGATCAATGTAAAGTTGGCACAAAGTGAAGCAGATATTCTTCATGAGGCCATAAAACTAAAAGATAAGAATGGTAACAAAGATGAAGAAGTTATAAGAATCCTTACAACAAGAAGCAAGATCCAACTTGTTGCAACTTTCAATCGCTATAGAGATGACCATGGAATTGCCATTACCAAGAAATTGTCCGATGAAGCATCTGATGACTTTCACAAGGCAGTGCACATAGCTATTCGCTGCATCCAAGATCATAAGAAATACTATGAAAAGGTTCTACGAAATGCAATGAAAGGAGGTGGAACCAATGAGGATGCACTGACACGTGTGATTGTGACAAGGGCTGAGAAAGACTTAAATGACATCAAAGAGATTTATTATAAGAGAAACAGTGTTCACTTAGAGGATTCAGTGGCTAAAGAAACTTCAGGAGACTACAAGAAATTTCTCCTAACCTTGATGGGAAAGGAGGACTAA 987 0.4154 MATLIAPTNHSPLEDAEAIRKAVKGWGTDEKVIITILGHRDAIQRQKIREAYYELFQEDLIKRLESELSGDFERAMYRWIVEPSERYALLANIALRHADRNYDVIVEIACALSPEELFIVRRTYHNRYHHSLEEDVAANTSGHLRQASFFLFLYNFQLLVGLVSSFRYGGNEINVKLAQSEADILHEAIKLKDKNGNKDEEVIRILTTRSKIQLVATFNRYRDDHGIAITKKLSDEASDDFHKAVHIAIRCIQDHKKYYEKVLRNAMKGGGTNEDALTRVIVTRAEKDLNDIKEIYYKRNSVHLEDSVAKETSGDYKKFLLTLMGKED 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03584 328 Gene3D Annexin 256 326 IPR037104 GO:0005509|GO:0005544
Aip10g03584 328 ProSiteProfiles Annexin repeat profile. 10 81 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 SUPERFAMILY Annexin 3 327 IPR037104 GO:0005509|GO:0005544
Aip10g03584 328 ProSiteProfiles Annexin repeat profile. 176 250 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 Pfam Annexin 15 76 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 Pfam Annexin 261 323 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 Pfam Annexin 181 245 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 Pfam Annexin 92 147 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 PRINTS Annexin family signature 24 46 IPR001464 GO:0005509|GO:0005544
Aip10g03584 328 PRINTS Annexin family signature 311 324 IPR001464 GO:0005509|GO:0005544
Aip10g03584 328 PRINTS Annexin family signature 267 287 IPR001464 GO:0005509|GO:0005544
Aip10g03584 328 PRINTS Annexin family signature 64 80 IPR001464 GO:0005509|GO:0005544
Aip10g03584 328 PRINTS Annexin family signature 91 112 IPR001464 GO:0005509|GO:0005544
Aip10g03584 328 Gene3D Annexin 175 253 IPR037104 GO:0005509|GO:0005544
Aip10g03584 328 ProSiteProfiles Annexin repeat profile. 254 325 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 PANTHER ANNEXIN 6 328 - -
Aip10g03584 328 PANTHER ANNEXIN 6 328 - -
Aip10g03584 328 SMART annex3 99 151 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 SMART annex3 271 323 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 SMART annex3 196 249 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 SMART annex3 27 79 IPR018502 GO:0005509|GO:0005544
Aip10g03584 328 ProSitePatterns Annexin repeat signature. 271 323 IPR018252 GO:0005509|GO:0005544
Aip10g03584 328 Gene3D Annexin 2 81 IPR037104 GO:0005509|GO:0005544
Aip10g03584 328 Gene3D Annexin 82 151 IPR037104 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03584 Aip-Chr10 134212258 134218901 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03584 10 134212258 134218901 Aip10g03584 10 134212258 134218901 ECH
Aip10g03584 10 134212258 134218901 Aip10g03584 10 134212258 134218901 PCT