Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03568 ATGGGTTTGTCTGCAGAATCACAGTTTCATGTTTTGGCTGTTGATGATAGTCTCATTGACAGAATGTTGATTGAAAGACTTCTCAAAACTTCATCATTTCATGTTACTGCAGTGGACTCAGGAAGTAAGGCTTTAAAATTTCTTGGATTGGTTGAAGAAGAGCAGAGAAATGAAGAGCCTTCCTTTGTTGCTCAAAAAACTCATAATCAGGATGTAGATGTGAACCTGATCATAACAGATTATTGTATGCCAGAAATGACAGGCTATGATCTTCTTAGAAAGATCAAGGAATCAAAATCTCTTAAAGATATACCAGTTGTGATTATGTCCTCAGAGAATGTTCCATCAAGGATCAATAGATGCTTAGAAGAAGGAGCTGAAGAATTCTTTCTGAAACCAGTTCAACAATCTGATGTAAATAAGCTGAGGCCCCATTTATTGAAATCAAAGGTTAAGGAAGTGGGAGAGGAAGACCAACTCATCAACCTCAATAGAAAGGACATAAATGAAATTTTAGCCTAA 522 0.364 MGLSAESQFHVLAVDDSLIDRMLIERLLKTSSFHVTAVDSGSKALKFLGLVEEEQRNEEPSFVAQKTHNQDVDVNLIITDYCMPEMTGYDLLRKIKESKSLKDIPVVIMSSENVPSRINRCLEEGAEEFFLKPVQQSDVNKLRPHLLKSKVKEVGEEDQLINLNRKDINEILA 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03568 173 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 157 IPR045279 GO:0009736
Aip10g03568 173 PANTHER RESPONSE REGULATOR ARR8, PUTATIVE-RELATED 3 157 - -
Aip10g03568 173 SUPERFAMILY CheY-like 8 142 IPR011006 -
Aip10g03568 173 Gene3D - 4 156 - -
Aip10g03568 173 SMART REC_2 9 143 IPR001789 GO:0000160
Aip10g03568 173 ProSiteProfiles Response regulatory domain profile. 10 147 IPR001789 GO:0000160
Aip10g03568 173 CDD REC_typeA_ARR 11 142 - -
Aip10g03568 173 Pfam Response regulator receiver domain 11 139 IPR001789 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03568 Aip-Chr10 134085849 134087846 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Aip10g03568 Response_reg 1.7e-19 CL0304
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03568 10 134085849 134087846 Aip08g02481 08 106369143 106374633 PCT