Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03521 ATGGAAACAAAACAGACCACTACTCTGCATAGATTATTTCTTTGGTTCTTCTTGATGAACATCTTCATCACCATTACCAGAACAAAAGCACAATCATCAACCCTAAACTACGTTGGAGATGACTGCCAAAACTCGACAAAACAATCTCTAACAAGTGGATTCAAAACCAACCTCAACAGCGTCCTCTCATGGCTTTCCTCTGATGCTACCACAAGCAAGGGCTACAACTATACCACCGTCGGAACCGCCACACGCGATGCCGTCTATGGCTTCTACAACTGCAGAGGTGATGTCACCGGAACCTTCTGCCAGTTTTGCCTCTCCACTGCAGCTTCAGACATTCTCCAGCACTGCCCAAACAGGTCATCAGCAGTGATATGGTATAACTACTGCATACTCAGATACTCTAACCATGCCTTCTATGGTAATCTTACAACTACCCCATCATGGCAAACTCTTGGGACCAAGAACAGCACCAACAGCACACAAGAACTCCAGAAAGCAGAGACTTATATGCAGATTTTGATAAAGAATGCTACTGCAGAGAACAATTACCTGTTGTATGCAGTGGGTGAGTTCAATGCTGGTGATTCATTAGGGAAAAGGTATGGATTGGTGCAGTGTACTAGGGACCTTACTAGTGACAAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTGGATCTCCAAGCTGTTTGACAAGGTATGATGATTATATGTTCTACAAGATTCAAGGATCTTCTCCTTTGCCTAATTCAGATGCATTATTGCCAGAGGACACTCCTATATCAATACAGTATAACTCTCAAGAAGGTCAAGGAGACGATTCATTGAATGCTGACCTTCCGGCAGTTCCTCTGATTTGGATTCGACAGAGCACTAATAACTTTTCAAATTCTTGCAAATTAGGGGAAGGTGGTTTTGGTCCCGTTTATAAGGGAAGTTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTTTCAAAAACATCTGGTCAAGGTTTATATGAGTTCAAGAATGAAGTAATATTCATAGCCAAATTACAACATAGGAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGCAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCACCTATTCGAAACATTTCCTGTCTTGTTGTCAGATGTGGAAAAACGAAAGCATCTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTATACCTTCACGAAGATTCTAGACTTAAAGTAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATTTCAGATTTTGGATTAGCAAGAGCATTTGAAAAAGGCCAAGACGAAGAAAATACTGGAAGGGTTATGGGCACCTACGGATATATGGCTCCTGAATATGCCATGGAAGGATTATATTCAATAAAATCAGACGTTTTTAGTTTTGGAGTTCTTCTACTAGAAATCATTTGTGGCAAAAAGAGCAGCGGATTCTATTTTTCAGAACATGGTCAAAGTCTTCTTATATATAGTTGGAAACTATGGTGTAAAGGAGAATGTTTGGAGCTAGTAGATCCTATACTAGAAGATAAATACCCAAGAAATGAAGTTAAAAGGTATATACATATTGGTTTACTGTGTGTACAAGCAGATGCAGTAGATCGACCAACAATGTCTACAATTGTTGTGATGCTAGCAAACGAGACAATGTCACTTCCTAATCCTAACCATCCTGCATTTTCAGTTGGAAGAAAGATCAAAGACGAGCCACCATCAAATACTTTTGTTAAGGATCTTTCGGTCAATAAAATATCAGTTTCAAATAGTTTACCTAGGTAA 1911 0.3951 METKQTTTLHRLFLWFFLMNIFITITRTKAQSSTLNYVGDDCQNSTKQSLTSGFKTNLNSVLSWLSSDATTSKGYNYTTVGTATRDAVYGFYNCRGDVTGTFCQFCLSTAASDILQHCPNRSSAVIWYNYCILRYSNHAFYGNLTTTPSWQTLGTKNSTNSTQELQKAETYMQILIKNATAENNYLLYAVGEFNAGDSLGKRYGLVQCTRDLTSDKCRQCLNAMLDQVPKCCASKVGWQVGSPSCLTRYDDYMFYKIQGSSPLPNSDALLPEDTPISIQYNSQEGQGDDSLNADLPAVPLIWIRQSTNNFSNSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLYEFKNEVIFIAKLQHRNLVRLLGCCVEQNEKLLIYEYMSNSSLALHLFETFPVLLSDVEKRKHLSWKVRMNIIKGIARGLLYLHEDSRLKVIHRDMKASNVLLDQDMNPKISDFGLARAFEKGQDEENTGRVMGTYGYMAPEYAMEGLYSIKSDVFSFGVLLLEIICGKKSSGFYFSEHGQSLLIYSWKLWCKGECLELVDPILEDKYPRNEVKRYIHIGLLCVQADAVDRPTMSTIVVMLANETMSLPNPNHPAFSVGRKIKDEPPSNTFVKDLSVNKISVSNSLPR 636
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03521 636 ProSitePatterns Serine/Threonine protein kinases active-site signature. 439 451 IPR008271 GO:0004672|GO:0006468
Aip10g03521 636 Gene3D Phosphorylase Kinase; domain 1 274 385 - -
Aip10g03521 636 Gene3D - 35 140 IPR038408 -
Aip10g03521 636 Gene3D - 147 254 IPR038408 -
Aip10g03521 636 Gene3D Transferase(Phosphotransferase) domain 1 386 599 - -
Aip10g03521 636 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 275 634 - -
Aip10g03521 636 PANTHER CYSTEINE-RICH RECEPTOR-LIKE KINASE 28 260 - -
Aip10g03521 636 ProSiteProfiles Protein kinase domain profile. 310 604 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03521 636 SMART serkin_6 310 594 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03521 636 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 275 634 - -
Aip10g03521 636 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 28 260 - -
Aip10g03521 636 ProSiteProfiles Gnk2-homologous domain profile. 146 254 IPR002902 -
Aip10g03521 636 CDD STKc_IRAK 316 589 - -
Aip10g03521 636 Pfam Protein tyrosine and serine/threonine kinase 314 588 IPR001245 GO:0004672|GO:0006468
Aip10g03521 636 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Aip10g03521 636 Pfam Domain of unknown function (DUF3403) 591 636 IPR021820 GO:0004674
Aip10g03521 636 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Aip10g03521 636 Pfam Salt stress response/antifungal 161 252 IPR002902 -
Aip10g03521 636 SUPERFAMILY Protein kinase-like (PK-like) 295 604 IPR011009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Aip10g03521 Aip-Chr10 133641567 133646100 Dispersed/Tandem
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03521 4 635 Receptor kinase-like Gene Family AT4G05200 40.805 1.28e-154 460
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g03521 PK_Tyr_Ser-Thr 7.3e-49 CL0016