Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03520 ATGATGGAAGCAATCCATAGATTATTTCTTTGGTTCTTCTTGATGAACATCTTCATCACCATCACCACAACAAGAGCACAATCATCATCACTGAACTACGTTGGAGATGACTGCCAAAACTCATCACAACAATCTCTAACAACTGGATTCAAAACCAACCTCAACAGCCTCCTCTCATGGCTTTCATCTGATGGTGCCACAAGCAAGGGCTACAACTATACCACCGTTGGAACCGCCACACGCGATGTCATCTATGGCTTCTATAACTGCAGAGGTGATGTCACTGGAACCTTCTGCCAGTTTTGCCTCTCGACTGCAGCCTCAGACATTCCTCAGCACTGCCCAAACAGGTCATCAGCAGTGATATGGTATAACTACTGCATATTCAGATACTCCAACCATGCCTTCTATGGTAATCTTACAACTACCCCATCATGGCAAGTTCCTGCGACCAAGAACAGCACCAACAGCACACAAGAACTCCAGAAAGCAGAGACTTATATGCAGATTTTGATAAAGAATGCTACTGCGGAGAACAATTACCTGTTGTATGCAGTGGGTGAGTTCAATGCTGGTGGTTCATTAGGGAAAAGATATGGATTGGTGCAGTGTACTAGGGACCTTACTAGTGACAAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTGGATCTCCAAGCTGTTTGACAAGGTATGATGATTATATGTTCTACAAGATTCAAGGATCTTCTCCCTTGCCTAGTTCAGCCAAGAACAATTCAAGTAAGACTAAAACTTTGATTATCATCATAGTGAGTGTGTTGGTGCCAATAGTGCTACTAATTAGTGGCATCTACTTCATATGGAGGAAGAATCAATCAAATAATGATGCATTATTGTCCGAGAGCGCTCCTATATCAATAAATTATAACTCTCAAGAAGGTCAAGGAGAAAGTCAAGGAGACGATTCATTGAATGCTGACCTTCCTACAGTCCCTCTAATTTGGATTCGACAGAGCACTAATAACTTTTCAGATTCTTGCAAATTAGGAGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGTTTGCAAGATGGGACAGAAGTTGCCATCAAAAGACTTTCAAAAACATCTGGTCAAGGTTTATATGAGTTCAAGAATGAAGTAATATTCATAGCCAAATTACAACATAGAAACCTTGTGAGACTGTTGGGTTGTTGCGTTGAGCAAAATGAAAAGCTGCTTATATACGAGTACATGTCGAATTCAAGCCTTGCCCTTCACCTATTTGATGTGGAAAAACGAAAGCAACTAAGTTGGAAGGTTCGAATGAATATTATTAAAGGAATCGCACGAGGACTTCTATACCTACACGAAGATTCTAGACTTAGAGTAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATATCAGATTTTGGATTAGCAAGAACATTTGAAAAAGGCCAGAACGAAGACAGTACTAGAAGGGTTGTGGGTACCTACGGATATATGGCTCCTGAATATGCCATGGAAGGATTATACTCAGTAAAATCCGACGTTTTTAGTTTCGGAGTTCTTCTACTAGAAATCATTTGTGGCAAAAGGAATAATAAATTCCATGTTTCAGAACATGGTCAAAGTCTGCTTGAATATAGTTGGAGACTATGGTGTACAGGAGAATGTTTAAAGATAGTAGATCCTATATTAGAAAATAAATACACAAGAAATGAAGTTACAAGGTGTATACATATTGGTTTATTGTGTGTACAAGAAGATGCAGTAGATCGGCCGACAATGTCCACGGTGGTTGTTATGCTAGCAAGTGAGACAATGACACTTCCTATTCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGATCAAAGAAGAGCCAACATCAAGTGGTTTTGATAAGGATCCTTTGGTCAATGAAGTATCAATTTCAAATATTCTACCTAGATAA 2007 0.3926 MMEAIHRLFLWFFLMNIFITITTTRAQSSSLNYVGDDCQNSSQQSLTTGFKTNLNSLLSWLSSDGATSKGYNYTTVGTATRDVIYGFYNCRGDVTGTFCQFCLSTAASDIPQHCPNRSSAVIWYNYCIFRYSNHAFYGNLTTTPSWQVPATKNSTNSTQELQKAETYMQILIKNATAENNYLLYAVGEFNAGGSLGKRYGLVQCTRDLTSDKCRQCLNAMLDQVPKCCASKVGWQVGSPSCLTRYDDYMFYKIQGSSPLPSSAKNNSSKTKTLIIIIVSVLVPIVLLISGIYFIWRKNQSNNDALLSESAPISINYNSQEGQGESQGDDSLNADLPTVPLIWIRQSTNNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLYEFKNEVIFIAKLQHRNLVRLLGCCVEQNEKLLIYEYMSNSSLALHLFDVEKRKQLSWKVRMNIIKGIARGLLYLHEDSRLRVIHRDMKASNVLLDQDMNPKISDFGLARTFEKGQNEDSTRRVVGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIICGKRNNKFHVSEHGQSLLEYSWRLWCTGECLKIVDPILENKYTRNEVTRCIHIGLLCVQEDAVDRPTMSTVVVMLASETMTLPIPNHPAFSVGRKIKEEPTSSGFDKDPLVNEVSISNILPR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03520 668 Gene3D Phosphorylase Kinase; domain 1 312 425 - -
Aip10g03520 668 Pfam Protein tyrosine and serine/threonine kinase 354 618 IPR001245 GO:0004672|GO:0006468
Aip10g03520 668 ProSiteProfiles Protein kinase domain profile. 350 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03520 668 Gene3D - 31 136 IPR038408 -
Aip10g03520 668 Gene3D - 144 250 IPR038408 -
Aip10g03520 668 PANTHER PROTEIN KINASE DOMAIN 27 665 - -
Aip10g03520 668 SUPERFAMILY Protein kinase-like (PK-like) 335 636 IPR011009 -
Aip10g03520 668 ProSiteProfiles Gnk2-homologous domain profile. 142 250 IPR002902 -
Aip10g03520 668 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Aip10g03520 668 Pfam Domain of unknown function (DUF3403) 623 668 IPR021820 GO:0004674
Aip10g03520 668 Gene3D Transferase(Phosphotransferase) domain 1 426 628 - -
Aip10g03520 668 CDD STKc_IRAK 356 621 - -
Aip10g03520 668 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 665 - -
Aip10g03520 668 Pfam Salt stress response/antifungal 158 248 IPR002902 -
Aip10g03520 668 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Aip10g03520 668 SMART serkin_6 350 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03520 668 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03520 Aip-Chr10 133635045 133640262 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03520 6 668 Receptor kinase-like Gene Family AT4G21410 40.320 8.99e-166 489
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g03520 PK_Tyr_Ser-Thr 3.7e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03520 10 133635045 133640262 Aip10g03520 10 133635045 133640262 PCT