Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03517 ATGGAAACGAAGCTCACTACTACTATCCATGGATTATTTCTGTGGTTCTTCTTGCTGAGCTTCTTCATCTCCTTCACCACAACAAGAGCACAATCATCGTCCCCAAACTACGTTGGAGATGATTGCAAAAACTCGACGGAAGAATCCCTAACAAGTGGATTCAAAACCAACCTCAACAGCATCCTCTCATGGCTTTCCTCTGATGCTGCCACAAGCAAGGGCTACAACCATACCGCCATCGGAACCGCCACTCGCGATGCCGTCTATGGCCTCTATGACTGCAGAGGTGACGTGACAGGCACCTTCTGCCAGTTTTGCGTGTCCACTGCAGCTTCAGACATTGTTCAGCACTGTCCAAACAGATCATCAGCAGTGATATGGTACAACTACTGCATACTCAGATACTCCAACCATGACTTCTTTGGAAACCTTACAATAACCCCATCGTGGCAATTTCCTGGGACCAAGAACAGCACCAACAGCACACAAGAACTCCAGAAAGCAGAGACTTACATGCAGAGCTTGATAAAGAATGCTACTGTGGAGACCAACTTGCTGTATGCAATGGGTGAGTTCAATTCTGGTGGTTCTTCAGGGGAAAGGTATGGGTTGGTGCAGTGTAGTAGGGACCTTACTAGTGATCAGTGTAGGCAGTGTTTGAATGCTATGTTGGATCAAGTTCCTAAATGCTGTGCTTCAAAAGTTGGATGGCAAGTTTTGGCTCCAAGTTGTTTGATCAAGTATGATGATTTTATGTTCTACAAGATTACTACCAGTCAAGGACCTTCTCCATCATTCAATTCAGCCAATAATAAGGGTACAAGTAAGACAAAAACGTTGATAATCATCATAGTGAGTGTGTTGGTGGCATTAGTTCTACTAAGTTGTGGCATCTACTTCTTATGGAGGAAGAATCAATCAAATAATGATGCATTATTGTCAGAGACCACTCCTATATCAATACATTATAACCCATATCAAGGTCAAGGAGACGATTCATTGAATGCTGACCTTCCTACAATCCCTCTATTTTGGATTCGACAGAGCACTAATAACTTTTCAGATTCTTGCAAATTAGGGGAAGGTGGATTTGGTCCTGTTTATAAGGGAAGCTTACAAGATGGGACAGAAGTTGCCATCAAAAGACTCTCAAAAACATCTGGCCAAGGTTTAGATGAGTTCAAGAATGAAGTAATCTTCATAGCCAAACTACAACATAGGAACCTTGTGAGACTGTTGGGTTGTTGTGTTGAGGAAAATGAAAAGCTGCTTATATACGAGTACATGTCCAATTCAAGCCTTGCCCTTCATCTATTCGACATGGAAAAACGAAAGCAACTAAGTTGGAAGGTTCGAATGAATATTATCAAAGGAATCGCACGAGGACTTCTATACCTTCATGAAGATTCTAGACTTAAAATAATTCATAGAGATATGAAAGCTAGTAATGTTCTACTTGATCAAGATATGAATCCAAAAATATCAGATTTTGGACTAGCAAGGACATTTGAAAAAGGCCAGAACGAAGAAAACACTAGAAGGGTTATGGGCACCTACGGATATATGGCTCCCGAATATGCTATGGAAGGGTTATATTCAGTAAAATCAGACGTTTTTAGTTTTGGAGTTCTTTTACTAGAAATCATTGCTGGCAAAAGGAATAGTGGATTCTATCTTTCAGATCATGGTCAAAGTCTTCTTGTATATAGTTGGAAACTATGGTGTGAAGGAGAATGTTTAGAGTTAGTAGATCCTATATTAGAAAATACATACATAAGAAATGAAGTTACAAGGTGTATTCATATTGGTTTGCTATGTGTACAAGAAGATGCAATAGATCGACCAACAATGTCTACAGTGGTTGTTATGCTAGCAAGTGAGACAATGACACTTCCTAATCCTAATCATCCTGCATTTTCAGTTGGAAGAAAGTTCGGTAAAGAAGACGAGTCAACGTCAAAGACTTCTAAAGATAATATCTCTGTCAATGAAGTATCAATCTCAAATGTTTTTCCTAGATAA 2022 0.3991 METKLTTTIHGLFLWFFLLSFFISFTTTRAQSSSPNYVGDDCKNSTEESLTSGFKTNLNSILSWLSSDAATSKGYNHTAIGTATRDAVYGLYDCRGDVTGTFCQFCVSTAASDIVQHCPNRSSAVIWYNYCILRYSNHDFFGNLTITPSWQFPGTKNSTNSTQELQKAETYMQSLIKNATVETNLLYAMGEFNSGGSSGERYGLVQCSRDLTSDQCRQCLNAMLDQVPKCCASKVGWQVLAPSCLIKYDDFMFYKITTSQGPSPSFNSANNKGTSKTKTLIIIIVSVLVALVLLSCGIYFLWRKNQSNNDALLSETTPISIHYNPYQGQGDDSLNADLPTIPLFWIRQSTNNFSDSCKLGEGGFGPVYKGSLQDGTEVAIKRLSKTSGQGLDEFKNEVIFIAKLQHRNLVRLLGCCVEENEKLLIYEYMSNSSLALHLFDMEKRKQLSWKVRMNIIKGIARGLLYLHEDSRLKIIHRDMKASNVLLDQDMNPKISDFGLARTFEKGQNEENTRRVMGTYGYMAPEYAMEGLYSVKSDVFSFGVLLLEIIAGKRNSGFYLSDHGQSLLVYSWKLWCEGECLELVDPILENTYIRNEVTRCIHIGLLCVQEDAIDRPTMSTVVVMLASETMTLPNPNHPAFSVGRKFGKEDESTSKTSKDNISVNEVSISNVFPR 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03517 673 Gene3D - 149 253 IPR038408 -
Aip10g03517 673 Gene3D - 36 140 IPR038408 -
Aip10g03517 673 PANTHER PROTEIN KINASE DOMAIN 27 670 - -
Aip10g03517 673 ProSiteProfiles Protein kinase domain profile. 353 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03517 673 Pfam Salt stress response/antifungal 159 249 IPR002902 -
Aip10g03517 673 Pfam Salt stress response/antifungal 42 137 IPR002902 -
Aip10g03517 673 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Aip10g03517 673 Pfam Domain of unknown function (DUF3403) 626 673 IPR021820 GO:0004674
Aip10g03517 673 Pfam Protein tyrosine and serine/threonine kinase 357 622 IPR001245 GO:0004672|GO:0006468
Aip10g03517 673 ProSitePatterns Serine/Threonine protein kinases active-site signature. 474 486 IPR008271 GO:0004672|GO:0006468
Aip10g03517 673 SUPERFAMILY Protein kinase-like (PK-like) 338 637 IPR011009 -
Aip10g03517 673 ProSiteProfiles Gnk2-homologous domain profile. 36 140 IPR002902 -
Aip10g03517 673 Gene3D Transferase(Phosphotransferase) domain 1 429 633 - -
Aip10g03517 673 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 27 670 - -
Aip10g03517 673 CDD STKc_IRAK 359 624 - -
Aip10g03517 673 Gene3D Phosphorylase Kinase; domain 1 324 428 - -
Aip10g03517 673 SMART serkin_6 353 629 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03517 Aip-Chr10 133618825 133624562 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03517 18 673 Receptor kinase-like Gene Family AT4G05200 42.647 0.0 531
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Aip10g03517 PK_Tyr_Ser-Thr 2.8e-48 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03517 10 133618825 133624562 Aip10g03517 10 133618825 133624562 PCT