Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03512 ATGGCTGAAGAAGAAGTTCAAGTTAATCAACAACAACAAAGGGTAGTGATGATCCAAGATGCATCAAGAGAGGTTAATTTAGAAGCAATTATGATGGCCACCAAAAAGTTCTCTCTTAAATCCGGAGATCATCTCACAATTGTTCCAATTCTTGATTGGTTCAGTAGTCCTATGGGTTATATGATGAGAGTTGATTCCAATTACTTCATTTCAACCAACAAGAAAGTTATTGAGGAACATAGCAAGAGATGGCTAGATCTTCGTAACTCGGATCTCTTCGATCACTTCAAAAAGAATGAGccttattatacttgctcaattccaattttaaatatacaaacattgtttatttatttCAGACGTATGCACAAAGAGATGAAGCACAACCTTGACAAATTCTCTTGTCGTCTCTATAAGATAAAAGGTAACAACTCTATTGAAAGGTTGAAGCCTGCAAAATCAACAGATAATAATAATAATAGCTTCAAATCACATGGCAAAAGGCATGAAAATGCGGATGAACAATCTTCTCTAGCGGCCAAGTCATCATCGTCAAGCGACTTATTCTCTTCAAGTATTTACAGCACTGAAGCGTCAACATCATCAAGTGTGGCAAGTTCGCGACAACTAGGACAACAAATAGACAACCACCTCGAACAACAACAACAACCAGATTTCGAAAACCCGGTTTGCAGCAAGTGCAAGAACCGAAGACCGAGGCCGCGGTTGAAGATAGAGTTGAGTTACTCGGAGTTGTCGAAAGCGACAAACGGATTCTCTCAGAAGAATTTCTTGTCGGAAGGAGGATTTGGAGCGGTGTACAAAGGACAACTGAGTAACGGAATGAGAGTGGCCGTGAAGCAGCACAAGAACACAAGCTTCCAAGGAGACAAGGAGTTTCAGTCGGAGGTTAGTGTTCTTAGAGAAGCAAGACATGAGAATGTTTTGATGCTTTTGGGTTCATGCTCTGAGGGACATAACAGGATTCTTGTTTATGAATATGTCTGCAATGGATCCCTTGATCAACATCTCTCACAACACTCTCGATCACCTCTTAGTTGGGAAGATAGGATCAAAGTAGCAATTGGAGTTGCGAAGGGGTTGTTGTATTTACACTCCAAAAACATCATTCACAGAGATTTGCGACCAAACAATATTCTTATAACACATGATCATCATCCTCTGATAGGTGATTTCGGGTTGGCAAGAACACAAAATCAAGACTCGATACACTCGACAGAATTGGTCGGAACGTTAGGATATTTGGCGCCAGAATATTTCGAATGTGGCAAAGTGTCAACCAAAACAGATGTTTACTCTTTTGGTGTTGTTCTTTTAGAGCTAATTACTGGAATGAGAACCATTGACAAAAGACTTGGAGGGAGAAGCCTTGTGGGTTGGGCAAGGCCACTATTAAGAGAGAGGAATTATCCAGATTTAATTGATGAAAGGATTAAAGAAGATTATGATATCCATAAACTATTTTGGATGGTTCGTTTAGCTGAGAAATGTGTAAGCAAAGACCCTCAAAAACGACTCAGTATGCTTGCGGTGGTTAATGCTTTGAATGGCATAGTAGAAGGAAGTACATGCATCAAAATAAAGGAATATTCCCCAGCAAGATCAGACTCATTCTACAGTGATTCTGAATCTGATAATGATGATGAAGATGAATTGCATGGTTATGAATTTGAAGAAGAAAAAAGCAATATTTGGAAGGTCAGCATGACAGCATGGAGTACAAGAATAAAGAGTAGCTTGGTGCACAAGCATCCTACATTAACACAGGGTCATGAAACAGGAAACCATCGAATCATGACAAACATGCTTGTATGTTTGAATCTAGAAGTCAAGTCTAAGAAACCACCGTTAAATTATGGTAAAATTGCAGGCTTTCCACTTCCATCCACTAAGCAAAATGTTGAAAATGCACGAGCATTTTATCTCAAAAGCGTACATGATGAACAGCTGATGCTTACTATAGCCGCAGCAGAGGCAGTAAAGATCAATTACACCGAACGTCTAACGTTGATGTACTGGCTCACCGAGATAATCGTTCATCTCCTGGTCTAA 2073 0.3893 MAEEEVQVNQQQQRVVMIQDASREVNLEAIMMATKKFSLKSGDHLTIVPILDWFSSPMGYMMRVDSNYFISTNKKVIEEHSKRWLDLRNSDLFDHFKKNEPYYTCSIPILNIQTLFIYFRRMHKEMKHNLDKFSCRLYKIKGNNSIERLKPAKSTDNNNNSFKSHGKRHENADEQSSLAAKSSSSSDLFSSSIYSTEASTSSSVASSRQLGQQIDNHLEQQQQPDFENPVCSKCKNRRPRPRLKIELSYSELSKATNGFSQKNFLSEGGFGAVYKGQLSNGMRVAVKQHKNTSFQGDKEFQSEVSVLREARHENVLMLLGSCSEGHNRILVYEYVCNGSLDQHLSQHSRSPLSWEDRIKVAIGVAKGLLYLHSKNIIHRDLRPNNILITHDHHPLIGDFGLARTQNQDSIHSTELVGTLGYLAPEYFECGKVSTKTDVYSFGVVLLELITGMRTIDKRLGGRSLVGWARPLLRERNYPDLIDERIKEDYDIHKLFWMVRLAEKCVSKDPQKRLSMLAVVNALNGIVEGSTCIKIKEYSPARSDSFYSDSESDNDDEDELHGYEFEEEKSNIWKVSMTAWSTRIKSSLVHKHPTLTQGHETGNHRIMTNMLVCLNLEVKSKKPPLNYGKIAGFPLPSTKQNVENARAFYLKSVHDEQLMLTIAAAEAVKINYTERLTLMYWLTEIIVHLLV 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03512 690 ProSitePatterns Tyrosine protein kinases specific active-site signature. 376 388 IPR008266 GO:0004672|GO:0006468
Aip10g03512 690 ProSiteProfiles Protein kinase domain profile. 259 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Aip10g03512 690 PANTHER - 19 582 - -
Aip10g03512 690 SUPERFAMILY Protein kinase-like (PK-like) 246 534 IPR011009 -
Aip10g03512 690 MobiDBLite consensus disorder prediction 148 180 - -
Aip10g03512 690 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 19 582 - -
Aip10g03512 690 Gene3D Transferase(Phosphotransferase) domain 1 335 540 - -
Aip10g03512 690 SMART tyrkin_6 259 522 IPR020635 GO:0004713|GO:0006468
Aip10g03512 690 Pfam Protein tyrosine and serine/threonine kinase 262 521 IPR001245 GO:0004672|GO:0006468
Aip10g03512 690 Gene3D Phosphorylase Kinase; domain 1 223 334 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03512 Aip-Chr10 133564411 133574686 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03512 247 588 Trihelix Transcription Factor Family AT5G38560 40.169 1.14e-76 258
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Aip10g03512 PK_Tyr_Ser-Thr 3e-52 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03512 10 133564411 133574686 Aip10g03512 10 133564411 133574686 PCT