Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03503 ATGTCTTCATTCAAATCATACGGCAAAGTTGATGAACATGACCAAATGCTACACCAAACCCAAATAAAAACCCGAAAGAGAATCATAATCATAACCCTCTCCTCAATAATCCTCGTTGCTGTTGTCCTTGCTGCTGTTTTTGGAATTCTCAATAATTCTCGTGATCATAACTCTCAACAAGATGGTGGTTCAGTGCTCGCCACGTCGGTGAAGGCGATTTGCGACGTGACATTGTACAAGGAATCATGTTACAGTAGCCTGAGCTCTGTTGTGAACTCATCAGCAGGGGAGGTTAAGCCAGAGGAGCTATTAAGGTTGTCCATTAAGGTGGCCTTAGAAGAAGTGTCAAATGTTGTTAGTAGCTATTTCTCTTCTGATAGTGGGGGGCATAATGGACATTTCCAAGGCTTGAATAATGATGGTAGGGCAAAGGAGGCTTTAGACAATTGTAAAGAGCTTTTGGATCTTGGAGTTGATCATCTTAATAACTCTTTGTCTTCTGTGGATTCCTCTTCCCTTTTTGAAATCTTTGATGATCTTCAAACATGGTTAAGTGCTGCAGGTACATACCAACAAACTTGCATTGAAGGGTTTGATGAGGAAAAAGAATCACTAAAATTGAATGCAACAAACTACCTTAAAAACTCAACAGAGTTCACCAGTAACAGCCTGGCCATCATCACATGGATGAAGAAGGCGGCCGCAATGACCGTGAGCCGGCGGCGACGCCTGCTAAGTTCATCATTTCCAGAATGGGTTAGTTCCAAGGACAGGAAGTTACTTGGAAGCAAAGAAAAGAGTAATATTGTTGTGGCCAAAGATGGGAGTGGGAAATACAAGACAATATCCGAGGCATTGAAACATGTTCCAGAGAAGAGTAGTAAGAGGACAGTGATTTATGTGAAGAGAGGAGTTTACTATGAGAATGTTAGAGTTGAGAAGAACAAATGGAATGTGATGATGATTGGTGATGGCATGAATGCTACTATTGTTTCTGCTAGCCTTAACTTTGTTGATGGCACACCAACCTTTTCATCTGCTACTTTTGCTGTGTTTGGGAAGAATTTCATAGCAAGAGACATGGGATTTAGAAACACAGCTGGTCCACAGAAGCATCAAGCAGTGGCACTAATGACAACTGGGGATGAAGCTGTTTATTACAGATGCCAATTTGATGCATTTCAAGACACACTCTATGCTCATTCCAATCGCCAATTTTACAGAGAATGCAACATTTTTGGTACAGTTGATTTCATCTTTGGCAACTCTGCTGTTGTCATTCAAAATTGTAACATTTTCCCAAAGTTACCAATTCCTGGCCAGCAGAACACTATCACTGCACAAGGCAAAACTGATCCCAACATGAACACAGGTATCTCAATACAAAATTGCAAGATTTCAGGCTTTGGGAACTTGAGTTCTATCCAAACATATTTGGGAAGGCCATGGAAGGATTACTCAACAACAGTGTTCATTAGATCCAGAATGGAAGCTTTAATTAACCCAAATGGATGGTTACCTTGGGTAGGAAACTCAGCACCAGACACCATCTATTATGCTGAATTTCAGAACTATGGACCAGGGGCTTCTACAGCAAATAGAGTAAAGTGGAAGGGCTTGAGAGCTATTTCTTCTAAACAAGCTACCAAGTTTACAGTCAAGACTTTTCTTGGTGGCCAAAGATGGATTCCTGCATCTTCTGCTCCTTTTCAGTCTGATCTGTGA 1725 0.4116 MSSFKSYGKVDEHDQMLHQTQIKTRKRIIIITLSSIILVAVVLAAVFGILNNSRDHNSQQDGGSVLATSVKAICDVTLYKESCYSSLSSVVNSSAGEVKPEELLRLSIKVALEEVSNVVSSYFSSDSGGHNGHFQGLNNDGRAKEALDNCKELLDLGVDHLNNSLSSVDSSSLFEIFDDLQTWLSAAGTYQQTCIEGFDEEKESLKLNATNYLKNSTEFTSNSLAIITWMKKAAAMTVSRRRRLLSSSFPEWVSSKDRKLLGSKEKSNIVVAKDGSGKYKTISEALKHVPEKSSKRTVIYVKRGVYYENVRVEKNKWNVMMIGDGMNATIVSASLNFVDGTPTFSSATFAVFGKNFIARDMGFRNTAGPQKHQAVALMTTGDEAVYYRCQFDAFQDTLYAHSNRQFYRECNIFGTVDFIFGNSAVVIQNCNIFPKLPIPGQQNTITAQGKTDPNMNTGISIQNCKISGFGNLSSIQTYLGRPWKDYSTTVFIRSRMEALINPNGWLPWVGNSAPDTIYYAEFQNYGPGASTANRVKWKGLRAISSKQATKFTVKTFLGGQRWIPASSAPFQSDL 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03503 574 SUPERFAMILY Pectin lyase-like 266 571 IPR011050 -
Aip10g03503 574 ProSitePatterns Pectinesterase signature 2. 412 421 IPR033131 -
Aip10g03503 574 Pfam Pectinesterase 268 559 IPR000070 GO:0030599|GO:0042545
Aip10g03503 574 Gene3D Invertase/pectin methylesterase inhibitor family protein 67 231 IPR035513 -
Aip10g03503 574 Pfam Plant invertase/pectin methylesterase inhibitor 69 226 IPR006501 GO:0004857
Aip10g03503 574 SMART PMEI_2 65 226 IPR006501 GO:0004857
Aip10g03503 574 PANTHER PECTINESTERASE 5 572 - -
Aip10g03503 574 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 69 230 IPR035513 -
Aip10g03503 574 CDD PMEI-like_3 72 232 - -
Aip10g03503 574 Gene3D - 262 574 IPR012334 -
Aip10g03503 574 TIGRFAM PME_inhib: pectinesterase inhibitor domain 46 230 IPR006501 GO:0004857
Aip10g03503 574 PANTHER PECTINESTERASE 5 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03503 Aip-Chr10 133477817 133483590 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03503 7 574 Carbohydrate Esterase AT3G10710 53.913 0.0 639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03503 10 133477817 133483590 Aip10g03503 10 133477817 133483590 PCT