Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g03500 ATGGGGTCTCAAGGTGGTGGTGAAAGTAATGGTAAACATGCACAGCTTCAGCCTTTGGCACGGCAAAACTCAATGTACAGTCTTACGCTCGATGAGGTTCAGAATCAATTAGGTGACTTAGGAAAACCCCTAGCTAGTATGAACCTTGATGAGCTTCTAAAAAATGTATGGACTGCTGAGGCCAACCAGTCTATAGGTATGGAAATTGACCGCACAACACAAGCTAATCAAGCTGCGCTGCAGCATCAAGCTAGTCTATCGATAACTAGTGCGCTTGGCAAGAAGACAGTTGATGAGGTATGGAGAGATATCCAGCAACATAAAGATAACAACGAGAAGAAGCCTCGAGACAGACAAGCTACATTGGGAGAGATGACCTTGGAGGCTTTCTTGGCGAAAGCAGGGGTCGGGATTGTCCCTGAAGCATCGGGTAATACTAAAAGTGCTGGTCCTTTAGCTGTTGCTGATTCTAATTTAACAGCACCACCATTCCCTCCACAAGGTCCAATGATGCAATATGCACAACCACAGTATCAGCATCCTCAGCAAAGTTTAATGGGGATGTATATGGCTGGCCAGAACATAGCACAGCCATTGCACATGGGGGCTGGTGCTGCTTTGGATGTTCCATATGCTGATGGTCAGGTGGCAATGCCTTCACCTTTGATGGGAAGCTTGTCCGATACGAAGATACATGGGAGGAAAAGGGGCACACCGGAGGACATATTGGAGAAGACGGTGGAAAGGAGGCAGAAGAGGATGATCAAGAATCGGGAATCTGCTGCCCGATCTAGAGCAAGGAAGCAGGCTTACACAACGGAATTAGAGAATAAGGTGTCGCGCCTGGAAGAGGAAAATGAAAAGCTGAGGAAACGGAAGGAACTAGAGAACCTGTTGTCTAGTGCACCCCCACCACCCCAACCTCGATATCAGATTCGCCGAACATCATCTGCCTCGTTCTGA 963 0.4777 MGSQGGGESNGKHAQLQPLARQNSMYSLTLDEVQNQLGDLGKPLASMNLDELLKNVWTAEANQSIGMEIDRTTQANQAALQHQASLSITSALGKKTVDEVWRDIQQHKDNNEKKPRDRQATLGEMTLEAFLAKAGVGIVPEASGNTKSAGPLAVADSNLTAPPFPPQGPMMQYAQPQYQHPQQSLMGMYMAGQNIAQPLHMGAGAALDVPYADGQVAMPSPLMGSLSDTKIHGRKRGTPEDILEKTVERRQKRMIKNRESAARSRARKQAYTTELENKVSRLEEENEKLRKRKELENLLSSAPPPPQPRYQIRRTSSASF 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g03500 320 MobiDBLite consensus disorder prediction 293 320 - -
Aip10g03500 320 CDD bZIP_plant_BZIP46 249 295 - -
Aip10g03500 320 Gene3D - 247 301 - -
Aip10g03500 320 PANTHER BZIP TRANSCRIPTION FACTOR 2 318 - -
Aip10g03500 320 MobiDBLite consensus disorder prediction 251 272 - -
Aip10g03500 320 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 247 292 IPR004827 GO:0003700|GO:0006355
Aip10g03500 320 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Aip10g03500 320 SUPERFAMILY Leucine zipper domain 249 294 IPR046347 GO:0003700|GO:0006355
Aip10g03500 320 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 318 IPR043452 GO:0003700|GO:0045893
Aip10g03500 320 SMART brlzneu 245 301 IPR004827 GO:0003700|GO:0006355
Aip10g03500 320 Pfam bZIP transcription factor 249 293 IPR004827 GO:0003700|GO:0006355
Aip10g03500 320 Coils Coil 265 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g03500 Aip-Chr10 133456701 133460979 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g03500 12 320 bZIP Transcription Factor Family AT3G56850 51.250 8.70e-85 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Aip10g03500 bZIP_1 1.9e-13 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Aip10g03500 10 133456701 133460979 Aip10g03500 10 133456701 133460979 PCT