Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Aip10g01347 ATGGTGCTGATCCAAGAAGAAATGGATCCGTCCTATGTTCAATTGACCAATACAGAAGACGAGGAAATTGATGCTACCTTGACAGCGGAAGATGAAACGATAGACTATGAGGTTCTGAAGAAGCGCATATGGAAAGACCGTGTCCTTCTCCAGAAGATGAAGGAGAAATTTAAGAAGGACGAATCTGAAAACAAAGAAGCCAAGCAAGAAGCGTCTAGGAAGAAAAAGATGTCTAGGGCACAAGACTCCGTCCTCAAATACATGGTCAAGATCATGAAGGTTTGCAAAGCTCGTGGATTTGTATATGGCATCGTCCCTGAAAAAGATGAGTCGTCAAGCATACACCTTCTCCATGATCTTCAAGATGCAACACTAGGATCTCTTCTTTCATCACTGATGCAACACTGTATGCCGCCACAAAGGAGGTATCCTTTGGATAAAGGCGTGGCCCCGCCGTGGTGGCCTAATGGGTCAGAGGTATGGTGGGGTCAACAGGGCCTTTTGGCTCAAGAACAGGGACCACCACCGTATAAGAAACCCCATGATTTGAAGAAGGCATGGAAGGTTTCGGTTTTGGCTTCAGTTATAAAGCACATGTCCCCTGACTTGGAAAAATTGAGAAGGCTTGTGACTCAATCAAAGACCTTACAAGATAGGATGACTGCCAAAGATAGCGCTACTTGGTCCAAAGTTGTGAACAAAGAAGAAACTTTGTTGAAACTTACCAACAAATGTCTTAAGATTTCTCCTTCTTCATCTAAGGACGAAGAGAATAATAAGGAAGACGACGAGGGAGAAACTGAAGTTTTTGAGTCATCCTCAATAAATTCTATTAATAATTCTCTTGATCATGTTTTGTTTGGTGGTGGTGGCAGTAGCAGCACTGGAGATAGTGAAAAAAGAAAGTGTAATTTTGATAGTAATAATAATGATAATAGTTTTGTGGACAAACTACTGTATACATGTCAGAACATAGATTGTCCACAAAGCCATTTGTCTATGGGATTTAGAGACAAGAATTCAAGGATGGACCACGAGTCGATGTGCGCTTTTCGCAGTGCCAATCATCAGGGAAGTAACAGCAGCAATAAGAATTCGAAGGCTTTCCATGATTACCCGTCGAGTGAGGAGAGGATGACAAGTGTTGGAGATTGGATGAATATGGAGGTAGCTAAGGCCAACAACAACAATAACAATAATAATAACTTTGGTGACACTGATTTTGGTGATATTGATATTATGAATGGAATGGAAGAGATTGCGGGTGAAGCTTCTGGTGAGGACAATTTAGAGGACAATTTAGAGTTGTGGCTGAATGACATTGAAGATTGTGAGTTACTTGCAGCATTAGAGATGGTTAAAGCAAATAGCGTGATGGATTCCACTCATCAGAATATACCATAA 1404 0.4131 MVLIQEEMDPSYVQLTNTEDEEIDATLTAEDETIDYEVLKKRIWKDRVLLQKMKEKFKKDESENKEAKQEASRKKKMSRAQDSVLKYMVKIMKVCKARGFVYGIVPEKDESSSIHLLHDLQDATLGSLLSSLMQHCMPPQRRYPLDKGVAPPWWPNGSEVWWGQQGLLAQEQGPPPYKKPHDLKKAWKVSVLASVIKHMSPDLEKLRRLVTQSKTLQDRMTAKDSATWSKVVNKEETLLKLTNKCLKISPSSSKDEENNKEDDEGETEVFESSSINSINNSLDHVLFGGGGSSSTGDSEKRKCNFDSNNNDNSFVDKLLYTCQNIDCPQSHLSMGFRDKNSRMDHESMCAFRSANHQGSNSSNKNSKAFHDYPSSEERMTSVGDWMNMEVAKANNNNNNNNNFGDTDFGDIDIMNGMEEIAGEASGEDNLEDNLELWLNDIEDCELLAALEMVKANSVMDSTHQNIP 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Aip10g01347 467 Coils Coil 427 447 - -
Aip10g01347 467 Coils Coil 50 77 - -
Aip10g01347 467 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 18 110 IPR006957 GO:0005634
Aip10g01347 467 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 109 465 IPR006957 GO:0005634
Aip10g01347 467 Gene3D - 106 245 IPR023278 GO:0003700|GO:0005634
Aip10g01347 467 PANTHER ETHYLENE INSENSITIVE PROTEIN 18 110 - -
Aip10g01347 467 SUPERFAMILY DNA-binding domain of EIN3-like 114 238 IPR023278 GO:0003700|GO:0005634
Aip10g01347 467 MobiDBLite consensus disorder prediction 249 273 - -
Aip10g01347 467 Pfam Ethylene insensitive 3 39 110 IPR006957 GO:0005634
Aip10g01347 467 Pfam Ethylene insensitive 3 111 236 IPR006957 GO:0005634
Aip10g01347 467 PANTHER ETHYLENE INSENSITIVE PROTEIN 109 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Aip10g01347 Aip-Chr10 22278680 22280421 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Aip10g01347 15 403 EIL Transcription Factor Family AT5G10120 40.816 2.88e-101 309
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Aip10g01347 EIN3 3.9e-64 No_clan