LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Aip10g01267	ATGGAGGTTTGCAAAGCTCGTGGATTCGTTTATGGCATCGTCCCTGAAAATGGTAAACCAATTACTGGTAGTTCGGATAGTTTGCGAGAATGGTGGAAAGAAAATATCAGATTTGACCAAACTGCCCCTAAAGCAATTGCAAAGTATTTACCGTTACTTGAAAAGGGAGAATTAGATGAGTCGTCAAGCATACACCTTCTCCAAGATCTTCAAGATGCAACACTAGGATCTCTTCTTTCAGCACTGATGCAACACTGTGTGCCGCCACAGAGGAAGTATCCTTTGGAGAAAGGCGTGGCTCCGCCGTGGTGGCCTAATGGGTCAGAGGCATGGTGGGGCAAACAGGGCTCTTTGGCTCAAGAACACGGGCCACCACCGTATAAGAAACCCCATGATTTGAAGAAGGCATGGAAGGTTTCGGTATTGGCTTCGGTTATAAAGCACATGTCCCCTGACTTAGAGAAATTGAGAAGGCTCGTGACTCAATCAAGGACCTTGCAAGATAAGATGACTGCCAAAGATAACGTTACTTGGTCTAAAGTTGTGAGCCAAGAAGAAGCTTTGTTGAGACTTACCAACAAGTGTCTTAAGATTTCCCCTTCTTCGTCCAGCGACGAGGAGAATAATAAGGAAGACAGGGAGGGGGAAATTAAAGTCTTTGAGTCATCCCCAATAAGCTCTATTAATAATCCTCTTGATCATGTTTTGTTTGGTGGTGGCAGCAGTGGCAACAACGGAGGCAGTGAAAAAAGAAAGTGTGATTTTGATAGTAGTAATGATGGGAACAACAACAATAATAGTAATAGCTTTGTGGATAAACCAATATATACATGTCAGAACGTAGATTGTCCACAAAGCGATTTGTCTATGGGATTTAGAGACAAGAATTCAAGGATGGACCACGAGTCGATGTGTGCTTTTCGCAGTGCCACTCTCGATCATCAGGGGATTAATAGCAGCAATGAGAATTCCAAGGCTTTCCATGATTACCTGTCGAGTGAGGAGAGGATGACAAGTGTTGGAGATTGGATGAATATGGAGGTAGCTAAGGCCAATAACAACAATAATAATTTGGGTGACACTGATTTTGGTGATATTGATATTATGAATGGAACGGAAGAGATTGCAGGTGAAGCTTTTGGTGAGGACAATTTAGGGTTGTGGCTGAATGACATTGAAGATTGTGAGTTGTTTGCGGCATTGGAGATGGTTAAAGCAAATAGCGTGATGGATTCAACTCATCAGAATAATAATCCACCATTAATAAAGCATGATCATTTTTTCCCACATGACGGCCATCTTGACGATGAAGCAACTACTTCATCACTTTGGGACTATGCTAGTACTTCGTTTAAGAGCAACAACATTTGA	1371	0.4238	MEVCKARGFVYGIVPENGKPITGSSDSLREWWKENIRFDQTAPKAIAKYLPLLEKGELDESSSIHLLQDLQDATLGSLLSALMQHCVPPQRKYPLEKGVAPPWWPNGSEAWWGKQGSLAQEHGPPPYKKPHDLKKAWKVSVLASVIKHMSPDLEKLRRLVTQSRTLQDKMTAKDNVTWSKVVSQEEALLRLTNKCLKISPSSSSDEENNKEDREGEIKVFESSPISSINNPLDHVLFGGGSSGNNGGSEKRKCDFDSSNDGNNNNNSNSFVDKPIYTCQNVDCPQSDLSMGFRDKNSRMDHESMCAFRSATLDHQGINSSNENSKAFHDYLSSEERMTSVGDWMNMEVAKANNNNNNLGDTDFGDIDIMNGTEEIAGEAFGEDNLGLWLNDIEDCELFAALEMVKANSVMDSTHQNNNPPLIKHDHFFPHDGHLDDEATTSSLWDYASTSFKSNNI	456

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Aip10g01267	456	Gene3D	-	56	195	IPR023278	GO:0003700\|GO:0005634
	Aip10g01267	456	PANTHER	ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN	1	415	IPR006957	GO:0005634
	Aip10g01267	456	MobiDBLite	consensus disorder prediction	204	219	-	-
	Aip10g01267	456	SUPERFAMILY	DNA-binding domain of EIN3-like	64	189	IPR023278	GO:0003700\|GO:0005634
	Aip10g01267	456	MobiDBLite	consensus disorder prediction	199	271	-	-
	Aip10g01267	456	Pfam	Ethylene insensitive 3	1	186	IPR006957	GO:0005634
	Aip10g01267	456	PANTHER	ETHYLENE INSENSITIVE PROTEIN	1	415	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Aip10g01267	Aip-Chr10	20123854	20125554	Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Aip10g01267	1	400	EIL Transcription Factor Family	AT5G65100	42.174	6.17e-110	334

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	EIL	Aip10g01267		EIN3	7.7e-96	No_clan